The Deep-Sea Chemosymbiotic Clam Archivesica marissinica is a species of deep-sea clam in the family Vesicomyidae, commonly found at the Haima cold seep on the northwest continental slope of the South China Sea. This species is well-adapted to extreme environments and relies on symbiotic sulfur-oxidizing bacteria housed in its gills for nutrition. Archivesica marissinica plays a significant role in cold seep ecosystems by contributing to nutrient cycling and supporting diverse microbial and faunal communities.
Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
---|---|---|---|---|---|---|
Archivesica marissinica | Mollusca | Deep-Sea Clam | Hydrothermal vent | 1,361 | Haima cold seep in the South China Sea | 2291877 |
Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
---|---|---|---|---|---|---|---|---|
ASM1484369v1 | 1.5Gb | Chromosome | 2020 | JABXNX01 | Hong Kong Baptist University | PRJNA629898 | 93.50% | 28,949 |
Title | Journal | Pubmed ID |
---|---|---|
Host-Endosymbiont Genome Integration in a Deep-Sea Chemosymbiotic Clam | Molecular Biology and Evolution | 32956455 |
Gene ID | Description |
---|---|
Ama22632 | |
Ama22633 | |
Ama22634 | |
Ama22635 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
Ama22636 | |
Ama22637 | |
Ama22638 | |
Ama22639 | |
Ama22640 | |
Ama22642 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
Ama22644 | SGNH_HYDRO DOMAIN-CONTAINING PROTEIN |
Ama22645 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
Ama22646 | |
Ama22647 | |
Ama22649 | ALPHA-(1,3)-FUCOSYLTRANSFERASE C-RELATED |
Ama22651 | |
Ama22652 | |
Ama22653 | |
Ama22655 | |
Ama22656 | |
Ama22657 | |
Ama22658 | |
Ama22659 | EGF-LIKE DOMAIN-CONTAINING PROTEIN |
Ama22662 | INHIBITOR OF APOPTOSIS |
Ama22663 | RNA POLYMERASE II TRANSCRIPTIONAL COACTIVATOR |
Ama22664 | |
Ama22665 | |
Ama22666 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
Ama22668 | |
Ama22669 | |
Ama22670 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
Ama22671 | |
Ama22673 | ALPHA-(1,3)-FUCOSYLTRANSFERASE C-RELATED |
Ama22674 | NEUROTRANSMITTER GATED ION CHANNEL |
Ama22675 | NEUROTRANSMITTER GATED ION CHANNEL |
Ama22676 | |
Ama22677 | NEUROTRANSMITTER GATED ION CHANNEL |
Ama22678 | PUTATIVE-RELATED |
Ama22680 | ANKYRIN REPEAT PROTEIN |
Ama22681 | GOLGI SNARE BET1-RELATED |
Ama22682 | |
Ama22684 | |
Ama22685 | ALPHA-(1,3)-FUCOSYLTRANSFERASE C-RELATED |
Ama22686 | ALPHA-(1,3)-FUCOSYLTRANSFERASE C-RELATED |
Ama22689 | RHO-GTPASE-ACTIVATING PROTEIN LRG1 |
Ama22690 | SIALATE O-ACETYLESTERASE |
Ama22691 | RNA POLYMERASE-ASSOCIATED PROTEIN CTR9 |
Ama22693 | ZINC FINGER PROTEIN |
Ama22698 | HOMEOBOX PROTEIN ARISTALESS |
Ama22701 | ALPHA-(1,3)-FUCOSYLTRANSFERASE C-RELATED |