The Deep-Sea Chemosymbiotic Clam Archivesica marissinica is a species of deep-sea clam in the family Vesicomyidae, commonly found at the Haima cold seep on the northwest continental slope of the South China Sea. This species is well-adapted to extreme environments and relies on symbiotic sulfur-oxidizing bacteria housed in its gills for nutrition. Archivesica marissinica plays a significant role in cold seep ecosystems by contributing to nutrient cycling and supporting diverse microbial and faunal communities.
Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
---|---|---|---|---|---|---|
Archivesica marissinica | Mollusca | Deep-Sea Clam | Hydrothermal vent | 1,361 | Haima cold seep in the South China Sea | 2291877 |
Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
---|---|---|---|---|---|---|---|---|
ASM1484369v1 | 1.5Gb | Chromosome | 2020 | JABXNX01 | Hong Kong Baptist University | PRJNA629898 | 93.50% | 28,949 |
Title | Journal | Pubmed ID |
---|---|---|
Host-Endosymbiont Genome Integration in a Deep-Sea Chemosymbiotic Clam | Molecular Biology and Evolution | 32956455 |
Gene ID | Description |
---|---|
Ama22513 | |
Ama22514 | FAM124 DOMAIN-CONTAINING PROTEIN-RELATED |
Ama22515 | BETA-HEXOSAMINIDASE |
Ama22516 | |
Ama22517 | CXC DOMAIN-CONTAINING PROTEIN-RELATED |
Ama22519 | PALMITOYLTRANSFERASE ZDHHC16 |
Ama22520 | ZINC FINGER DHHC DOMAIN CONTAINING PROTEIN |
Ama22521 | PALMITOYLTRANSFERASE ZDHHC16 |
Ama22522 | REVERSE TRANSCRIPTASES |
Ama22523 | RAS-ASSOCIATING DOMAIN CONTAINING PROTEIN |
Ama22524 | |
Ama22525 | LIN-24 (TWENTY-FOUR) LIKE |
Ama22526 | SI:CH73-193C12.2-RELATED |
Ama22528 | |
Ama22529 | |
Ama22530 | |
Ama22531 | SET DOMAIN-CONTAINING PROTEIN-RELATED |
Ama22533 | COPINE FAMILY PROTEIN 1 |
Ama22534 | COPINE FAMILY PROTEIN 1 |
Ama22535 | |
Ama22536 | |
Ama22537 | |
Ama22538 | |
Ama22539 | |
Ama22540 | |
Ama22541 | |
Ama22542 | |
Ama22543 | |
Ama22544 | E3 UBIQUITIN-PROTEIN LIGASE KCMF1 |
Ama22550 | |
Ama22551 | TRANSPOSABLE ELEMENT-RELATED |
Ama22552 | |
Ama22553 | FASTING-INDUCIBLE INTEGRAL MEMBRANE PROTEIN TM6P1-RELATED |
Ama22554 | |
Ama22555 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN-RELATED |
Ama22556 | |
Ama22557 | |
Ama22558 | ENDONUCLEASE DOMAIN-CONTAINING 1 PROTEIN ENDOD1 |
Ama22559 | OXYSTEROL-BINDING PROTEIN-RELATED |
Ama22560 | NAD-DEPENDENT PROTEIN DEACYLASE SIRTUIN-5, MITOCHONDRIAL-RELATED |
Ama22561 | HAT FAMILY DIMERISATION DOMAINCONTAINING PROTEIN-RELATED |
Ama22562 | THIAMINE PYROPHOSPHATE ENZYMES |
Ama22565 | SODIUM-DEPENDENT GLUCOSE TRANSPORTER 1 |
Ama22566 | PIGGYBAC TRANSPOSABLE ELEMENT-DERIVED PROTEIN 4 |
Ama22567 | CXC DOMAIN-CONTAINING PROTEIN-RELATED |
Ama22568 | |
Ama22569 | CXC DOMAIN-CONTAINING PROTEIN-RELATED |
Ama22570 | TEKTIN |
Ama22571 | F20B24.22 |
Ama22573 | TRANSPOSABLE ELEMENT-RELATED |