The Deep-Sea Chemosymbiotic Clam Archivesica marissinica is a species of deep-sea clam in the family Vesicomyidae, commonly found at the Haima cold seep on the northwest continental slope of the South China Sea. This species is well-adapted to extreme environments and relies on symbiotic sulfur-oxidizing bacteria housed in its gills for nutrition. Archivesica marissinica plays a significant role in cold seep ecosystems by contributing to nutrient cycling and supporting diverse microbial and faunal communities.
Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
---|---|---|---|---|---|---|
Archivesica marissinica | Mollusca | Deep-Sea Clam | Hydrothermal vent | 1,361 | Haima cold seep in the South China Sea | 2291877 |
Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
---|---|---|---|---|---|---|---|---|
ASM1484369v1 | 1.5Gb | Chromosome | 2020 | JABXNX01 | Hong Kong Baptist University | PRJNA629898 | 93.50% | 28,949 |
Title | Journal | Pubmed ID |
---|---|---|
Host-Endosymbiont Genome Integration in a Deep-Sea Chemosymbiotic Clam | Molecular Biology and Evolution | 32956455 |
Gene ID | Description |
---|---|
Ama22041 | RAN BINDING PROTEIN |
Ama22042 | RNA-BINDING MOTIF PROTEIN 14B |
Ama22043 | POLYKETIDE SYNTHASE-RELATED |
Ama22044 | CARBOHYDRATE BINDING DOMAIN CONTAINING PROTEIN |
Ama22045 | SULFOTRANSFERASE SULT |
Ama22046 | CLASS II AMINOTRANSFERASE/8-AMINO-7-OXONONANOATE SYNTHASE |
Ama22047 | |
Ama22048 | AMILORIDE-SENSITIVE SODIUM CHANNEL-RELATED |
Ama22049 | |
Ama22050 | AMILORIDE-SENSITIVE SODIUM CHANNEL-RELATED |
Ama22053 | NUCLEAR MITOTIC APPARATUS PROTEIN 1-RELATED |
Ama22061 | PROBABLE PEPTIDE CHAIN RELEASE FACTOR C12ORF65 |
Ama22062 | TRNA (URACIL-5-)-METHYLTRANSFERASE |
Ama22064 | RRNA METHYLTRANSFERASE 3, |
Ama22065 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
Ama22066 | CXC DOMAIN-CONTAINING PROTEIN-RELATED |
Ama22068 | RRNA METHYLTRANSFERASE 3, |
Ama22069 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
Ama22070 | CXC DOMAIN-CONTAINING PROTEIN-RELATED |
Ama22071 | BREAKPOINT CLUSTER REGION PROTEIN BCR |
Ama22072 | |
Ama22073 | BREAKPOINT CLUSTER REGION PROTEIN BCR |
Ama22074 | |
Ama22075 | CXC DOMAIN-CONTAINING PROTEIN-RELATED |
Ama22076 | F20B24.22 |
Ama22077 | |
Ama22078 | |
Ama22079 | FATTY ACID BINDING PROTEIN |
Ama22080 | DEOXYNUCLEOTIDYLTRANSFERASE TERMINAL-INTERACTING PROTEIN 1 |
Ama22082 | |
Ama22083 | MARINER MOS1 TRANSPOSASE-LIKE PROTEIN |
Ama22084 | RAS LIKE FAMILY 10 MEMBER B-RELATED |
Ama22085 | |
Ama22088 | FLOTILLIN-RELATED |
Ama22089 | BTB/POZ DOMAIN-CONTAINING |
Ama22090 | SOLUTE CARRIER FAMILY 22 MEMBER |
Ama22091 | 52 KDA REPRESSOR OF THE INHIBITOR OF THE PROTEIN KINASE-LIKE PROTEIN-RELATED |
Ama22092 | NICOTINATE-NUCLEOTIDE PYROPHOSPHORYLASE [CARBOXYLATING] |
Ama22093 | BRCA1-ASSOCIATED PROTEIN |
Ama22096 | TRPL TRANSLOCATION DEFECT PROTEIN 14 |
Ama22097 | PHENYLALANYL-TRNA SYNTHETASE BETA CHAIN AND LEUCINE-RICH REPEAT-CONTAINING PROTEIN 47 |
Ama22098 | |
Ama22103 | DYNEIN HEAVY CHAIN |
Ama22104 | |
Ama22105 | D123 PROTEIN |
Ama22106 | SPERMIDINE/SPERMINE SYNTHASE |
Ama22107 | CHITIN BINDING PERITROPHIN-A |
Ama22111 | CHITIN BINDING PERITROPHIN-A |
Ama22112 | |
Ama22113 |