About Archivesica marissinica

The Deep-Sea Chemosymbiotic Clam Archivesica marissinica is a species of deep-sea clam in the family Vesicomyidae, commonly found at the Haima cold seep on the northwest continental slope of the South China Sea. This species is well-adapted to extreme environments and relies on symbiotic sulfur-oxidizing bacteria housed in its gills for nutrition. Archivesica marissinica plays a significant role in cold seep ecosystems by contributing to nutrient cycling and supporting diverse microbial and faunal communities.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Archivesica marissinicaMolluscaDeep-Sea ClamHydrothermal vent1,361Haima cold seep in the South China Sea2291877

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
ASM1484369v11.5GbChromosome2020JABXNX01Hong Kong Baptist UniversityPRJNA62989893.50%28,949

References
TitleJournalPubmed ID
Host-Endosymbiont Genome Integration in a Deep-Sea Chemosymbiotic ClamMolecular Biology and Evolution32956455

Gene Information

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Gene IDDescription
Ama21854SODIUM/CHLORIDE DEPENDENT TRANSPORTER
Ama21855
Ama21856
Ama21857
Ama21858SODIUM/CHLORIDE DEPENDENT TRANSPORTER
Ama21859
Ama21861
Ama21862OSJNBA0013A04.12 PROTEIN
Ama21863CYSTEINE PROTEASE FAMILY C1-RELATED
Ama21865SEPTIN
Ama21866METALLOPHOSPHOESTERASE
Ama21868
Ama21869SODIUM/CHLORIDE DEPENDENT TRANSPORTER
Ama21870
Ama21871TRANSMEMBRANE GTPASE FZO1
Ama21872INTEGRATOR COMPLEX SUBUNIT 2
Ama21873MEDIATOR OF RNA POLYMERASE II TRANSCRIPTION SUBUNIT 31
Ama21874ELECTRON TRANSPORT OXIDOREDUCTASE
Ama21875T-COMPLEX-ASSOCIATED-TESTIS-EXPRESSED 1/ DYNEIN LIGHT CHAIN
Ama21876RNA POLYMERASE II TRANSCRIPTIONAL COACTIVATOR
Ama21877INHIBITOR OF APOPTOSIS
Ama21878G PROTEIN-COUPLED RECEPTOR KINASE/RIBOSOMAL PROTEIN S6 KINASE
Ama21879
Ama21881
Ama21884
Ama21885
Ama21886CXC DOMAIN-CONTAINING PROTEIN-RELATED
Ama21887
Ama21891LONG-CHAIN-FATTY-ACID--COA LIGASE
Ama21892
Ama21893
Ama21894-
Ama21895
Ama21896PUTATIVE PHOSPHOTRANSFERASE
Ama21897RNA RECOGNITION MOTIF RRM DOMAIN CONTAINING PROTEIN
Ama21898COMPLEMENT COMPONENT 1
Ama21899SNF2/RAD54 FAMILY MEMBER
Ama21901
Ama21903ALPHA-KETOGLUTARATE-DEPENDENT DIOXYGENASE ALKB HOMOLOG 2
Ama21906REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Ama21907L1 TRANSPOSABLE ELEMENT-RELATED
Ama21912
Ama21914
Ama21915
Ama21916
Ama21917CLATHRIN HEAVY CHAIN RELATED
Ama21918RIBOSOME MATURATION PROTEIN SBDS
Ama21919
Ama21920
Ama21921
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