About Archivesica marissinica

The Deep-Sea Chemosymbiotic Clam Archivesica marissinica is a species of deep-sea clam in the family Vesicomyidae, commonly found at the Haima cold seep on the northwest continental slope of the South China Sea. This species is well-adapted to extreme environments and relies on symbiotic sulfur-oxidizing bacteria housed in its gills for nutrition. Archivesica marissinica plays a significant role in cold seep ecosystems by contributing to nutrient cycling and supporting diverse microbial and faunal communities.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Archivesica marissinicaMolluscaDeep-Sea ClamHydrothermal vent1,361Haima cold seep in the South China Sea2291877

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
ASM1484369v11.5GbChromosome2020JABXNX01Hong Kong Baptist UniversityPRJNA62989893.50%28,949

References
TitleJournalPubmed ID
Host-Endosymbiont Genome Integration in a Deep-Sea Chemosymbiotic ClamMolecular Biology and Evolution32956455

Gene Information

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Gene IDDescription
Ama21502INHIBITOR OF APOPTOSIS
Ama21503RNA POLYMERASE II TRANSCRIPTIONAL COACTIVATOR
Ama21508SWAP-70 RECOMBINASE
Ama21509DEOXYRIBONUCLEASE TATDN2-RELATED
Ama21511MONOCARBOXYLATE TRANSPORTER
Ama21512MONOCARBOXYLATE TRANSPORTER
Ama21514MEMBER OF THE HIR1 FAMILY OF WD-REPEAT PROTEINS
Ama21515
Ama21516
Ama21518
Ama21519PROLYL 4-HYDROXYLASE ALPHA SUBUNIT
Ama21520FATTY ACID BINDING PROTEIN
Ama21521SH2B ADAPTER PROTEIN
Ama21522
Ama21523OVOCHYMASE-RELATED
Ama21524TRIACYLGLYCEROL LIPASE
Ama21525HILLARIN
Ama21527HILLARIN
Ama21529UNC-93 RELATED
Ama21530SOLUTE CARRIER FAMILY 5
Ama21531SOLUTE CARRIER FAMILY 5
Ama21533
Ama21535PROLINE OXIDASE
Ama21536
Ama21537CELL CYCLE CHECKPOINT PROTEIN RAD1
Ama21538ARGININOSUCCINATE LYASE
Ama21541RAB GTPASE-BINDING EFFECTOR PROTEIN
Ama21543SYNTAXIN
Ama21544
Ama2154752 KDA REPRESSOR OF THE INHIBITOR OF THE PROTEIN KINASE-LIKE PROTEIN-RELATED
Ama21550RAN GTPASE
Ama21551METHYLTRANSFERASE-RELATED
Ama21552
Ama21553UNCHARACTERIZED
Ama21556
Ama21557BONUS, ISOFORM C-RELATED
Ama21558BONUS, ISOFORM C-RELATED
Ama21559UNCHARACTERIZED
Ama21561
Ama21562DCTP PYROPHOSPHATASE 1
Ama21565
Ama21566BIFUNCTIONAL POLYMYXIN RESISTANCE PROTEIN ARNA
Ama21567SUGAR KINASE
Ama21569
Ama21570GPI TRANSAMIDASE COMPONENT PIG-T-RELATED
Ama21571CHLORIDE CHANNEL CLIC-LIKE PROTEIN 1
Ama21575ULP_PROTEASE DOMAIN-CONTAINING PROTEIN
Ama21576
Ama21582
Ama21584
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