The Deep-Sea Chemosymbiotic Clam Archivesica marissinica is a species of deep-sea clam in the family Vesicomyidae, commonly found at the Haima cold seep on the northwest continental slope of the South China Sea. This species is well-adapted to extreme environments and relies on symbiotic sulfur-oxidizing bacteria housed in its gills for nutrition. Archivesica marissinica plays a significant role in cold seep ecosystems by contributing to nutrient cycling and supporting diverse microbial and faunal communities.
Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
---|---|---|---|---|---|---|
Archivesica marissinica | Mollusca | Deep-Sea Clam | Hydrothermal vent | 1,361 | Haima cold seep in the South China Sea | 2291877 |
Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
---|---|---|---|---|---|---|---|---|
ASM1484369v1 | 1.5Gb | Chromosome | 2020 | JABXNX01 | Hong Kong Baptist University | PRJNA629898 | 93.50% | 28,949 |
Title | Journal | Pubmed ID |
---|---|---|
Host-Endosymbiont Genome Integration in a Deep-Sea Chemosymbiotic Clam | Molecular Biology and Evolution | 32956455 |
Gene ID | Description |
---|---|
Ama21502 | INHIBITOR OF APOPTOSIS |
Ama21503 | RNA POLYMERASE II TRANSCRIPTIONAL COACTIVATOR |
Ama21508 | SWAP-70 RECOMBINASE |
Ama21509 | DEOXYRIBONUCLEASE TATDN2-RELATED |
Ama21511 | MONOCARBOXYLATE TRANSPORTER |
Ama21512 | MONOCARBOXYLATE TRANSPORTER |
Ama21514 | MEMBER OF THE HIR1 FAMILY OF WD-REPEAT PROTEINS |
Ama21515 | |
Ama21516 | |
Ama21518 | |
Ama21519 | PROLYL 4-HYDROXYLASE ALPHA SUBUNIT |
Ama21520 | FATTY ACID BINDING PROTEIN |
Ama21521 | SH2B ADAPTER PROTEIN |
Ama21522 | |
Ama21523 | OVOCHYMASE-RELATED |
Ama21524 | TRIACYLGLYCEROL LIPASE |
Ama21525 | HILLARIN |
Ama21527 | HILLARIN |
Ama21529 | UNC-93 RELATED |
Ama21530 | SOLUTE CARRIER FAMILY 5 |
Ama21531 | SOLUTE CARRIER FAMILY 5 |
Ama21533 | |
Ama21535 | PROLINE OXIDASE |
Ama21536 | |
Ama21537 | CELL CYCLE CHECKPOINT PROTEIN RAD1 |
Ama21538 | ARGININOSUCCINATE LYASE |
Ama21541 | RAB GTPASE-BINDING EFFECTOR PROTEIN |
Ama21543 | SYNTAXIN |
Ama21544 | |
Ama21547 | 52 KDA REPRESSOR OF THE INHIBITOR OF THE PROTEIN KINASE-LIKE PROTEIN-RELATED |
Ama21550 | RAN GTPASE |
Ama21551 | METHYLTRANSFERASE-RELATED |
Ama21552 | |
Ama21553 | UNCHARACTERIZED |
Ama21556 | |
Ama21557 | BONUS, ISOFORM C-RELATED |
Ama21558 | BONUS, ISOFORM C-RELATED |
Ama21559 | UNCHARACTERIZED |
Ama21561 | |
Ama21562 | DCTP PYROPHOSPHATASE 1 |
Ama21565 | |
Ama21566 | BIFUNCTIONAL POLYMYXIN RESISTANCE PROTEIN ARNA |
Ama21567 | SUGAR KINASE |
Ama21569 | |
Ama21570 | GPI TRANSAMIDASE COMPONENT PIG-T-RELATED |
Ama21571 | CHLORIDE CHANNEL CLIC-LIKE PROTEIN 1 |
Ama21575 | ULP_PROTEASE DOMAIN-CONTAINING PROTEIN |
Ama21576 | |
Ama21582 | |
Ama21584 |