About Archivesica marissinica

The Deep-Sea Chemosymbiotic Clam Archivesica marissinica is a species of deep-sea clam in the family Vesicomyidae, commonly found at the Haima cold seep on the northwest continental slope of the South China Sea. This species is well-adapted to extreme environments and relies on symbiotic sulfur-oxidizing bacteria housed in its gills for nutrition. Archivesica marissinica plays a significant role in cold seep ecosystems by contributing to nutrient cycling and supporting diverse microbial and faunal communities.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Archivesica marissinicaMolluscaDeep-Sea ClamHydrothermal vent1,361Haima cold seep in the South China Sea2291877

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
ASM1484369v11.5GbChromosome2020JABXNX01Hong Kong Baptist UniversityPRJNA62989893.50%28,949

References
TitleJournalPubmed ID
Host-Endosymbiont Genome Integration in a Deep-Sea Chemosymbiotic ClamMolecular Biology and Evolution32956455

Gene Information

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Gene IDDescription
Ama21104METHYLTRANSF_11 DOMAIN-CONTAINING PROTEIN
Ama21106NEUROPEPTIDE Y RECEPTOR
Ama21107INHIBITOR OF APOPTOSIS
Ama21108REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Ama21109G-PROTEIN COUPLED RECEPTOR
Ama21110UNCHARACTERIZED
Ama21111HISTIDINE AMMONIA-LYASE
Ama21112MATING RESPONSE PROTEIN POI2
Ama21113TRANSCRIPTASE, PUTATIVE-RELATED-RELATED
Ama21114OPSIN
Ama21115MANNAN POLYMERASE II
Ama21117
Ama21118OPSIN
Ama21119BETA TRANSDUCIN-RELATED PROTEIN
Ama21121OPSIN
Ama21122
Ama211254-HYDROXYPHENYLPYRUVATE DIOXYGENASE
Ama21126
Ama21127TRANSPOSABLE ELEMENT-RELATED
Ama21128ALKALI-SENSITIVE LINKAGE PROTEIN 1
Ama21129ALKALI-SENSITIVE LINKAGE PROTEIN 1
Ama21130PROPERDIN
Ama21131
Ama21132
Ama21133
Ama21134ALKALI-SENSITIVE LINKAGE PROTEIN 1
Ama21135REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Ama21136ALKALI-SENSITIVE LINKAGE PROTEIN 1
Ama21137ALKALI-SENSITIVE LINKAGE PROTEIN 1
Ama21138ALKALI-SENSITIVE LINKAGE PROTEIN 1
Ama21139ALKALI-SENSITIVE LINKAGE PROTEIN 1
Ama21140ALKALI-SENSITIVE LINKAGE PROTEIN 1
Ama21141ZINC KNUCKLE DOMAINCONTAINING PROTEIN-RELATED
Ama21142MYOSIN
Ama21143EXONUCLEASE, PHAGE-TYPE/RECB, C-TERMINAL DOMAIN-CONTAINING PROTEIN
Ama21144THAP DOMAIN PROTEIN
Ama21145ALKALI-SENSITIVE LINKAGE PROTEIN 1
Ama21146ALKALI-SENSITIVE LINKAGE PROTEIN 1
Ama21147PIGGYBAC TRANSPOSABLE ELEMENT-DERIVED PROTEIN 4
Ama21148
Ama21149
Ama21150RPE-SPONDIN
Ama21153RNA-BINDING PROTEIN MUSASHI HOMOLOG RBP6
Ama21156PUTATIVE-RELATED
Ama21157GH02722P
Ama21158METHYLTRANSF_11 DOMAIN-CONTAINING PROTEIN
Ama21160XPA-BINDING PROTEIN 1-RELATED
Ama21161GLYCOSYLTRANSFERASE 14 FAMILY MEMBER
Ama21162METHYLTRANSFERASE
Ama21163DYNEIN LIGHT CHAIN
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