The Deep-Sea Chemosymbiotic Clam Archivesica marissinica is a species of deep-sea clam in the family Vesicomyidae, commonly found at the Haima cold seep on the northwest continental slope of the South China Sea. This species is well-adapted to extreme environments and relies on symbiotic sulfur-oxidizing bacteria housed in its gills for nutrition. Archivesica marissinica plays a significant role in cold seep ecosystems by contributing to nutrient cycling and supporting diverse microbial and faunal communities.
Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
---|---|---|---|---|---|---|
Archivesica marissinica | Mollusca | Deep-Sea Clam | Hydrothermal vent | 1,361 | Haima cold seep in the South China Sea | 2291877 |
Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
---|---|---|---|---|---|---|---|---|
ASM1484369v1 | 1.5Gb | Chromosome | 2020 | JABXNX01 | Hong Kong Baptist University | PRJNA629898 | 93.50% | 28,949 |
Title | Journal | Pubmed ID |
---|---|---|
Host-Endosymbiont Genome Integration in a Deep-Sea Chemosymbiotic Clam | Molecular Biology and Evolution | 32956455 |
Gene ID | Description |
---|---|
Ama21104 | METHYLTRANSF_11 DOMAIN-CONTAINING PROTEIN |
Ama21106 | NEUROPEPTIDE Y RECEPTOR |
Ama21107 | INHIBITOR OF APOPTOSIS |
Ama21108 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
Ama21109 | G-PROTEIN COUPLED RECEPTOR |
Ama21110 | UNCHARACTERIZED |
Ama21111 | HISTIDINE AMMONIA-LYASE |
Ama21112 | MATING RESPONSE PROTEIN POI2 |
Ama21113 | TRANSCRIPTASE, PUTATIVE-RELATED-RELATED |
Ama21114 | OPSIN |
Ama21115 | MANNAN POLYMERASE II |
Ama21117 | |
Ama21118 | OPSIN |
Ama21119 | BETA TRANSDUCIN-RELATED PROTEIN |
Ama21121 | OPSIN |
Ama21122 | |
Ama21125 | 4-HYDROXYPHENYLPYRUVATE DIOXYGENASE |
Ama21126 | |
Ama21127 | TRANSPOSABLE ELEMENT-RELATED |
Ama21128 | ALKALI-SENSITIVE LINKAGE PROTEIN 1 |
Ama21129 | ALKALI-SENSITIVE LINKAGE PROTEIN 1 |
Ama21130 | PROPERDIN |
Ama21131 | |
Ama21132 | |
Ama21133 | |
Ama21134 | ALKALI-SENSITIVE LINKAGE PROTEIN 1 |
Ama21135 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
Ama21136 | ALKALI-SENSITIVE LINKAGE PROTEIN 1 |
Ama21137 | ALKALI-SENSITIVE LINKAGE PROTEIN 1 |
Ama21138 | ALKALI-SENSITIVE LINKAGE PROTEIN 1 |
Ama21139 | ALKALI-SENSITIVE LINKAGE PROTEIN 1 |
Ama21140 | ALKALI-SENSITIVE LINKAGE PROTEIN 1 |
Ama21141 | ZINC KNUCKLE DOMAINCONTAINING PROTEIN-RELATED |
Ama21142 | MYOSIN |
Ama21143 | EXONUCLEASE, PHAGE-TYPE/RECB, C-TERMINAL DOMAIN-CONTAINING PROTEIN |
Ama21144 | THAP DOMAIN PROTEIN |
Ama21145 | ALKALI-SENSITIVE LINKAGE PROTEIN 1 |
Ama21146 | ALKALI-SENSITIVE LINKAGE PROTEIN 1 |
Ama21147 | PIGGYBAC TRANSPOSABLE ELEMENT-DERIVED PROTEIN 4 |
Ama21148 | |
Ama21149 | |
Ama21150 | RPE-SPONDIN |
Ama21153 | RNA-BINDING PROTEIN MUSASHI HOMOLOG RBP6 |
Ama21156 | PUTATIVE-RELATED |
Ama21157 | GH02722P |
Ama21158 | METHYLTRANSF_11 DOMAIN-CONTAINING PROTEIN |
Ama21160 | XPA-BINDING PROTEIN 1-RELATED |
Ama21161 | GLYCOSYLTRANSFERASE 14 FAMILY MEMBER |
Ama21162 | METHYLTRANSFERASE |
Ama21163 | DYNEIN LIGHT CHAIN |