The Deep-Sea Chemosymbiotic Clam Archivesica marissinica is a species of deep-sea clam in the family Vesicomyidae, commonly found at the Haima cold seep on the northwest continental slope of the South China Sea. This species is well-adapted to extreme environments and relies on symbiotic sulfur-oxidizing bacteria housed in its gills for nutrition. Archivesica marissinica plays a significant role in cold seep ecosystems by contributing to nutrient cycling and supporting diverse microbial and faunal communities.
Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
---|---|---|---|---|---|---|
Archivesica marissinica | Mollusca | Deep-Sea Clam | Hydrothermal vent | 1,361 | Haima cold seep in the South China Sea | 2291877 |
Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
---|---|---|---|---|---|---|---|---|
ASM1484369v1 | 1.5Gb | Chromosome | 2020 | JABXNX01 | Hong Kong Baptist University | PRJNA629898 | 93.50% | 28,949 |
Title | Journal | Pubmed ID |
---|---|---|
Host-Endosymbiont Genome Integration in a Deep-Sea Chemosymbiotic Clam | Molecular Biology and Evolution | 32956455 |
Gene ID | Description |
---|---|
Ama21039 | ALPHA KINASE/ELONGATION FACTOR 2 KINASE |
Ama21040 | PIGGYBAC TRANSPOSABLE ELEMENT-DERIVED PROTEIN 4 |
Ama21041 | |
Ama21042 | |
Ama21044 | INACTIVE PEPTIDYL-PROLYL CIS-TRANS ISOMERASE FKBP6 |
Ama21045 | |
Ama21046 | UNCHARACTERIZED |
Ama21047 | NIPSNAP-RELATED |
Ama21048 | |
Ama21049 | ADAPTOR COMPLEX SUBUNIT BETA FAMILY MEMBER |
Ama21050 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
Ama21051 | PEROXISOME ASSEMBLY PROTEIN 12 PEROXIN-12 |
Ama21052 | CADHERIN-23 |
Ama21059 | KELCH PROTEIN |
Ama21060 | EXPRESSED PROTEIN |
Ama21061 | |
Ama21062 | LD44762P |
Ama21063 | |
Ama21064 | PHAGE_INTEGRASE DOMAIN-CONTAINING PROTEIN |
Ama21065 | PROTEIN CBG03580 |
Ama21066 | |
Ama21067 | |
Ama21070 | |
Ama21072 | |
Ama21073 | |
Ama21074 | |
Ama21075 | |
Ama21076 | CXC DOMAIN-CONTAINING PROTEIN-RELATED |
Ama21077 | |
Ama21079 | TEKTIN |
Ama21080 | SUCCINATE/FUMARATE MITOCHONDRIAL TRANSPORTER-RELATED |
Ama21081 | - |
Ama21082 | NUCLEOLAR COMPLEX PROTEIN 4 |
Ama21083 | WD40 REPEAT PROTEIN |
Ama21084 | CYTOCHROME B561/FERRIC REDUCTASE TRANSMEMBRANE |
Ama21085 | |
Ama21086 | VACUOLAR SORTING PROTEIN VPS29 |
Ama21087 | DNA REPAIR PROTEIN RAD9 |
Ama21088 | PROTEIN PHOSPHATASE 2C |
Ama21090 | CARBONIC ANHYDRASE |
Ama21091 | |
Ama21092 | OXYSTEROL-BINDING PROTEIN-RELATED |
Ama21094 | UBIQUITIN LIGASE PROTEIN CHFR |
Ama21097 | 52 KDA REPRESSOR OF THE INHIBITOR OF THE PROTEIN KINASE-LIKE PROTEIN-RELATED |
Ama21098 | - |
Ama21099 | |
Ama210_5db7b01a | BRAKELESS PROTEIN |
Ama21100 | UBIQUITIN FUSION DEGRADATON PROTEIN 1 |
Ama21102 | CDC45-RELATED PROTEIN |
Ama21103 | ORGANIC ANION TRANSPORTER |