The Deep-Sea Chemosymbiotic Clam Archivesica marissinica is a species of deep-sea clam in the family Vesicomyidae, commonly found at the Haima cold seep on the northwest continental slope of the South China Sea. This species is well-adapted to extreme environments and relies on symbiotic sulfur-oxidizing bacteria housed in its gills for nutrition. Archivesica marissinica plays a significant role in cold seep ecosystems by contributing to nutrient cycling and supporting diverse microbial and faunal communities.
Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
---|---|---|---|---|---|---|
Archivesica marissinica | Mollusca | Deep-Sea Clam | Hydrothermal vent | 1,361 | Haima cold seep in the South China Sea | 2291877 |
Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
---|---|---|---|---|---|---|---|---|
ASM1484369v1 | 1.5Gb | Chromosome | 2020 | JABXNX01 | Hong Kong Baptist University | PRJNA629898 | 93.50% | 28,949 |
Title | Journal | Pubmed ID |
---|---|---|
Host-Endosymbiont Genome Integration in a Deep-Sea Chemosymbiotic Clam | Molecular Biology and Evolution | 32956455 |
Gene ID | Description |
---|---|
Ama20964 | |
Ama20965 | |
Ama20966 | THAP DOMAIN PROTEIN |
Ama20970 | DEOXYCYTIDYLATE DEAMINASE-RELATED |
Ama20971 | |
Ama20972 | |
Ama20973 | DEOXYCYTIDYLATE DEAMINASE-RELATED |
Ama20974 | PUTATIVE-RELATED |
Ama20975 | |
Ama20976 | THAP DOMAIN PROTEIN |
Ama20977 | |
Ama20978 | PYRUVOYL TETRAHYDROBIOPTERIN SYNTHASE |
Ama20979 | BONUS, ISOFORM C-RELATED |
Ama20980 | ATAXIN 2-RELATED |
Ama20981 | |
Ama20983 | |
Ama20985 | SOLUTE CARRIER FAMILY 13 MEMBER |
Ama20986 | |
Ama20991 | AQUAPORIN OR AQUAGLYCEROPORIN RELATED |
Ama20992 | LEUCINE RICH REPEAT KINASE 2 |
Ama20993 | |
Ama20994 | ADENYLATE CYCLASE TYPE 1 |
Ama20995 | |
Ama20996 | |
Ama20997 | OS01G0253100 PROTEIN |
Ama20998 | |
Ama20999 | WALL-ASSOCIATED RECEPTOR KINASE-LIKE 21 |
Ama21000 | SOLUTE CARRIER FAMILY 17 |
Ama21001 | INO80 COMPLEX SUBUNIT B |
Ama21002 | SERINE/THREONINE-PROTEIN KINASE TAO1-LIKE PROTEIN |
Ama21002.1.5db7de6f | SERINE/THREONINE-PROTEIN KINASE TAO1-LIKE PROTEIN |
Ama21003 | |
Ama21004 | |
Ama21017 | TRANSMEMBRANE PROTEIN INDUCED BY TUMOR NECROSIS FACTOR ALPHA |
Ama21019 | |
Ama21020 | |
Ama21021 | INHIBITOR OF APOPTOSIS |
Ama21023 | COILIN |
Ama21024 | CARBONIC ANHYDRASE |
Ama21026 | |
Ama21027 | |
Ama21028 | OLIGORIBONUCLEASE, MITOCHONDRIAL |
Ama21030 | |
Ama21032 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
Ama21033 | |
Ama21034 | PLACENTAL PROTEIN 6 |
Ama21035 | ZINC FINGER PROTEIN |
Ama21036 | PROTEIN DISPATCHED-RELATED |
Ama21037 | TRANSCRIPTION ELONGATION FACTOR SPT6 |
Ama21038 | TRANSCRIPTION ELONGATION FACTOR SPT6 |