The Deep-Sea Chemosymbiotic Clam Archivesica marissinica is a species of deep-sea clam in the family Vesicomyidae, commonly found at the Haima cold seep on the northwest continental slope of the South China Sea. This species is well-adapted to extreme environments and relies on symbiotic sulfur-oxidizing bacteria housed in its gills for nutrition. Archivesica marissinica plays a significant role in cold seep ecosystems by contributing to nutrient cycling and supporting diverse microbial and faunal communities.
Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
---|---|---|---|---|---|---|
Archivesica marissinica | Mollusca | Deep-Sea Clam | Hydrothermal vent | 1,361 | Haima cold seep in the South China Sea | 2291877 |
Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
---|---|---|---|---|---|---|---|---|
ASM1484369v1 | 1.5Gb | Chromosome | 2020 | JABXNX01 | Hong Kong Baptist University | PRJNA629898 | 93.50% | 28,949 |
Title | Journal | Pubmed ID |
---|---|---|
Host-Endosymbiont Genome Integration in a Deep-Sea Chemosymbiotic Clam | Molecular Biology and Evolution | 32956455 |
Gene ID | Description |
---|---|
Ama20558 | XPA-BINDING PROTEIN 1-RELATED |
Ama20559 | |
Ama20560 | PROTEIN KINASE RELATED |
Ama20561 | NA+/CA2+ K+ INDEPENDENT EXCHANGER |
Ama20562 | NA+/CA2+ K+ INDEPENDENT EXCHANGER |
Ama20563 | SOLUTE CARRIER FAMILY 13 MEMBER |
Ama20564 | SOLUTE CARRIER FAMILY 13 MEMBER |
Ama20565 | SOLUTE CARRIER FAMILY 13 MEMBER |
Ama20566 | SOLUTE CARRIER FAMILY 13 MEMBER |
Ama20567 | 52 KDA REPRESSOR OF THE INHIBITOR OF THE PROTEIN KINASE-LIKE PROTEIN-RELATED |
Ama20568 | INHIBITOR OF APOPTOSIS |
Ama20569 | |
Ama20570 | INTEGRASE CORE DOMAIN CONTAINING PROTEIN |
Ama20571 | SOLUTE CARRIER FAMILY 13 MEMBER |
Ama20572 | SOLUTE CARRIER FAMILY 13 MEMBER |
Ama20573 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
Ama20574 | G PROTEIN-COUPLED RECEPTOR KINASE/RIBOSOMAL PROTEIN S6 KINASE |
Ama20577 | |
Ama20578 | |
Ama20579 | SOLUTE CARRIER FAMILY 13 MEMBER |
Ama20580 | INHIBITOR OF APOPTOSIS |
Ama20581 | |
Ama20582 | |
Ama20583 | INTEGRASE CORE DOMAIN CONTAINING PROTEIN |
Ama20584 | PROTEIN CBG10425 |
Ama20585 | |
Ama20586 | SOLUTE CARRIER FAMILY 13 MEMBER |
Ama20587 | GOS-28 SNARE- RELATED |
Ama20588 | THAP DOMAIN PROTEIN |
Ama20589 | ATP-DEPENDENT DNA HELICASE |
Ama20590 | |
Ama20591 | |
Ama20592 | |
Ama20593 | |
Ama20595 | PHD/F-BOX CONTAINING PROTEIN |
Ama20597 | CALCIUM RELEASE-ACTIVATED CALCIUM CHANNEL PROTEIN 1 |
Ama20598 | EUKARYOTE SPECIFIC DSRNA BINDING PROTEIN |
Ama20599 | |
Ama20600 | NUCLEAR HORMONE RECEPTOR |
Ama20601 | UNCHARACTERIZED |
Ama20602 | PUTATIVE-RELATED |
Ama20603 | 60S RIBOSOMAL PROTEIN L6 |
Ama20604 | PESCADILLO - RELATED |
Ama20605 | 52 KDA REPRESSOR OF THE INHIBITOR OF THE PROTEIN KINASE-LIKE PROTEIN-RELATED |
Ama20606 | |
Ama20607 | |
Ama20608 | RAS-RELATED PROTEIN RAB |
Ama20609 | CENTROMERE PROTEIN Q |
Ama20610 | 52 KDA REPRESSOR OF THE INHIBITOR OF THE PROTEIN KINASE-LIKE PROTEIN-RELATED |
Ama20611 | RRNA METHYLTRANSFERASE 1, MITOCHONDRIAL |