The Deep-Sea Chemosymbiotic Clam Archivesica marissinica is a species of deep-sea clam in the family Vesicomyidae, commonly found at the Haima cold seep on the northwest continental slope of the South China Sea. This species is well-adapted to extreme environments and relies on symbiotic sulfur-oxidizing bacteria housed in its gills for nutrition. Archivesica marissinica plays a significant role in cold seep ecosystems by contributing to nutrient cycling and supporting diverse microbial and faunal communities.
Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
---|---|---|---|---|---|---|
Archivesica marissinica | Mollusca | Deep-Sea Clam | Hydrothermal vent | 1,361 | Haima cold seep in the South China Sea | 2291877 |
Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
---|---|---|---|---|---|---|---|---|
ASM1484369v1 | 1.5Gb | Chromosome | 2020 | JABXNX01 | Hong Kong Baptist University | PRJNA629898 | 93.50% | 28,949 |
Title | Journal | Pubmed ID |
---|---|---|
Host-Endosymbiont Genome Integration in a Deep-Sea Chemosymbiotic Clam | Molecular Biology and Evolution | 32956455 |
Gene ID | Description |
---|---|
Ama20417 | POTASSIUM CHANNEL, SUBFAMILY K |
Ama20418 | CXC DOMAIN-CONTAINING PROTEIN-RELATED |
Ama20419 | CXC DOMAIN-CONTAINING PROTEIN-RELATED |
Ama20420 | METHYLTHIORIBULOSE-1-PHOSPHATE DEHYDRATASE |
Ama20421 | CXC DOMAIN-CONTAINING PROTEIN-RELATED |
Ama20426 | INOSITOL 5-PHOSPHATASE |
Ama20428 | GPI MANNOSYLTRANSFERASE 2 |
Ama20429 | |
Ama20430 | SOLUTE CARRIER FAMILY 17 |
Ama20431 | SOLUTE CARRIER FAMILY 17 |
Ama20432 | SOLUTE CARRIER FAMILY 17 |
Ama20433 | |
Ama20434 | LP09875P |
Ama20435 | 52 KDA REPRESSOR OF THE INHIBITOR OF THE PROTEIN KINASE-LIKE PROTEIN-RELATED |
Ama20436 | CYTOCHROME P450 FAMILY 4 |
Ama20442 | |
Ama20443 | ATP-DEPENDENT PERMEASE MDL1, MITOCHONDRIAL |
Ama20446 | ENOS INTERACTING PROTEIN |
Ama20448 | CXC DOMAIN-CONTAINING PROTEIN-RELATED |
Ama20449 | SNF5 |
Ama20450 | SERINE/THREONINE-PROTEIN KINASE PIM |
Ama20451 | |
Ama20452 | UNCHARACTERIZED |
Ama20453 | |
Ama20455 | PROTEIN CBG03580 |
Ama20456 | |
Ama20458 | HL01030P-RELATED |
Ama20461 | SERINE/THREONINE-PROTEIN KINASE NEK |
Ama20462 | NEUROTRANSMITTER GATED ION CHANNEL |
Ama20463 | NEUROTRANSMITTER GATED ION CHANNEL |
Ama20464 | NEUROTRANSMITTER GATED ION CHANNEL |
Ama20465 | NEUROTRANSMITTER GATED ION CHANNEL |
Ama20467 | |
Ama20468 | |
Ama20469 | REVERSE TRANSCRIPTASES |
Ama20470 | |
Ama20471 | LOW-DENSITY LIPOPROTEIN RECEPTOR-RELATED |
Ama20473 | ACROSIN-RELATED |
Ama20474 | ATP-DEPENDENT DNA HELICASE |
Ama20475 | THAP DOMAIN PROTEIN |
Ama20476 | FRUCTOSE-BISPHOSPHATE ALDOLASE |
Ama20477 | REVERSE TRANSCRIPTASES |
Ama20478 | RIM BINDING PROTEIN-RELATED |
Ama20479 | RIM BINDING PROTEIN-RELATED |
Ama20480 | RIM BINDING PROTEIN-RELATED |
Ama20483 | MYB-BINDING PROTEIN 1A FAMILY MEMBER |
Ama20484 | HEAVY PROTEIN, PUTATIVE-RELATED |
Ama20485 | |
Ama20486 | UBIQUITIN-CONJUGATING ENZYME E2 |
Ama20488 | EUKARYOTIC TRANSLATION INITIATION FACTOR 4B/4H |