About Archivesica marissinica

The Deep-Sea Chemosymbiotic Clam Archivesica marissinica is a species of deep-sea clam in the family Vesicomyidae, commonly found at the Haima cold seep on the northwest continental slope of the South China Sea. This species is well-adapted to extreme environments and relies on symbiotic sulfur-oxidizing bacteria housed in its gills for nutrition. Archivesica marissinica plays a significant role in cold seep ecosystems by contributing to nutrient cycling and supporting diverse microbial and faunal communities.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Archivesica marissinicaMolluscaDeep-Sea ClamHydrothermal vent1,361Haima cold seep in the South China Sea2291877

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
ASM1484369v11.5GbChromosome2020JABXNX01Hong Kong Baptist UniversityPRJNA62989893.50%28,949

References
TitleJournalPubmed ID
Host-Endosymbiont Genome Integration in a Deep-Sea Chemosymbiotic ClamMolecular Biology and Evolution32956455

Gene Information

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Gene IDDescription
Ama20489OLIGOPEPTIDE TRANSPORTER-RELATED
Ama20490UNCHARACTERIZED
Ama20491CHROMATIN TARGET OF PRMT1 PROTEIN
Ama20492SERINE/THREONINE-PROTEIN KINASE
Ama20493
Ama20494ATP-DEPENDENT DNA HELICASE
Ama20495PRE-MRNA SPLICING FACTOR PRP8
Ama20496CELL FATE DETERMINING PROTEIN MAB21-RELATED
Ama20499CYTOCHROME P450 508A4-RELATED
Ama20500RNA POLYMERASE II TRANSCRIPTIONAL COACTIVATOR
Ama20501INHIBITOR OF APOPTOSIS
Ama20502ZINC FINGER PROTEIN
Ama20503REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Ama20504SULFOTRANSFERASE SULT
Ama20505SULFOTRANSFERASE SULT
Ama20506
Ama20507CXC DOMAIN-CONTAINING PROTEIN-RELATED
Ama20508ABHYDROLASE DOMAIN-CONTAINING PROTEIN
Ama20509MYO-INOSITOL-1 PHOSPHATE SYNTHASE
Ama20510CXC DOMAIN-CONTAINING PROTEIN-RELATED
Ama20511
Ama20512
Ama20515
Ama20518REVERSE TRANSCRIPTASES
Ama20519SODIUM-DEPENDENT GLUCOSE TRANSPORTER 1
Ama20520
Ama20528
Ama20529CCHC-TYPE DOMAIN-CONTAINING PROTEIN
Ama20531SODIUM-DEPENDENT GLUCOSE TRANSPORTER 1
Ama20532SODIUM-DEPENDENT GLUCOSE TRANSPORTER 1
Ama20533PHAGE_INTEGRASE DOMAIN-CONTAINING PROTEIN
Ama20534CARBOHYDRATE SULFOTRANSFERASE
Ama20535CARBOHYDRATE SULFOTRANSFERASE
Ama20537
Ama20538SODIUM-DEPENDENT GLUCOSE TRANSPORTER 1
Ama20540G-PROTEIN COUPLED RECEPTOR
Ama20541
Ama20542IP13529P
Ama20543T-BOX PROTEIN-RELATED
Ama20546
Ama20547
Ama20548THAP DOMAIN PROTEIN
Ama20550PHOSPHATIDYLINOSITOL SYNTHASE
Ama20551PHOSPHATIDYLSERINE DECARBOXYLASE
Ama20552REPLICATION FACTOR A 1, RFA1
Ama20553PHAGE_INTEGRASE DOMAIN-CONTAINING PROTEIN
Ama20554REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Ama20555ELECTRON TRANSFER FLAVOPROTEIN-UBIQUINONE OXIDOREDUCTASE
Ama20556HEDGEHOG-INTERACTING PROTEIN
Ama20557
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