About Archivesica marissinica

The Deep-Sea Chemosymbiotic Clam Archivesica marissinica is a species of deep-sea clam in the family Vesicomyidae, commonly found at the Haima cold seep on the northwest continental slope of the South China Sea. This species is well-adapted to extreme environments and relies on symbiotic sulfur-oxidizing bacteria housed in its gills for nutrition. Archivesica marissinica plays a significant role in cold seep ecosystems by contributing to nutrient cycling and supporting diverse microbial and faunal communities.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Archivesica marissinicaMolluscaDeep-Sea ClamHydrothermal vent1,361Haima cold seep in the South China Sea2291877

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
ASM1484369v11.5GbChromosome2020JABXNX01Hong Kong Baptist UniversityPRJNA62989893.50%28,949

References
TitleJournalPubmed ID
Host-Endosymbiont Genome Integration in a Deep-Sea Chemosymbiotic ClamMolecular Biology and Evolution32956455

Gene Information

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Gene IDDescription
Ama20052
Ama20053PEPTIDASE
Ama20054FMRFAMIDE RECEPTOR-RELATED
Ama20055
Ama20058LEUCINE-RICH REPEAT-CONTAINING PROTEIN 34
Ama20059PROTEIN SSUH2 HOMOLOG
Ama20060CRUMBS FAMILY MEMBER
Ama20061CELL DIVISION PROTEIN KINASE
Ama20074ZGC:195170
Ama20075
Ama20076DALRD3 PROTEIN
Ama20077GUANYLATE CYCLASE SOLUBLE SUBUNIT BETA-2
Ama20078GUANYLYL CYCLASE
Ama20079
Ama20080
Ama200812-OXOGLUTARATE (2OG) AND FE(II)-DEPENDENT OXYGENASE SUPERFAMILY PROTEIN-RELATED
Ama20082CALCIUM BINDING PROTEIN
Ama20083TUDOR DOMAIN CONTAINING PROTEIN
Ama20084G-PROTEIN COUPLED RECEPTOR
Ama20088COMM DOMAIN-CONTAINING PROTEIN 4-8 FAMILY MEMBER
Ama20089
Ama20090ZINC FINGER MYND DOMAIN CONTAINING PROTEIN 10
Ama20091
Ama20092COPPER AMINE OXIDASE
Ama20093TRANSPOSON
Ama20094-
Ama20095THAP DOMAIN PROTEIN
Ama20096NETRIN/LAMININ-RELATED
Ama20098CLASS II AMINOTRANSFERASE/8-AMINO-7-OXONONANOATE SYNTHASE
Ama20100CLASS II AMINOTRANSFERASE/8-AMINO-7-OXONONANOATE SYNTHASE
Ama20101INHIBITOR OF APOPTOSIS
Ama20102
Ama20103APPLE DOMAIN-CONTAINING PROTEIN
Ama20105SYNAPTIC ADHESION-LIKE MOLECULE SALM
Ama20108UNCHARACTERIZED
Ama20109BAX INHIBITOR-RELATED
Ama20110
Ama20111GUANYL-NUCLEOTIDE EXCHANGE FACTOR
Ama20112
Ama20113SHORT-CHAIN DEHYDROGENASE/REDUCTASE
Ama20114SHORT-CHAIN DEHYDROGENASE/REDUCTASE
Ama20115STRUCTURAL MAINTENANCE OF CHROMOSOMES SMC FAMILY MEMBER
Ama20116EXONUCLEASE, PHAGE-TYPE/RECB, C-TERMINAL DOMAIN-CONTAINING PROTEIN
Ama20117
Ama20118
Ama20121MITOCHONDRIAL IMPORT INNER MEMBRANE TRANSLOCASE SUBUNIT TIM-17
Ama20122ADHESION G-PROTEIN COUPLED RECEPTOR
Ama20123
Ama20124CANCER/TESTIS ANTIGEN 55
Ama20125DNA2/NAM7 HELICASE FAMILY
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