The Deep-Sea Chemosymbiotic Clam Archivesica marissinica is a species of deep-sea clam in the family Vesicomyidae, commonly found at the Haima cold seep on the northwest continental slope of the South China Sea. This species is well-adapted to extreme environments and relies on symbiotic sulfur-oxidizing bacteria housed in its gills for nutrition. Archivesica marissinica plays a significant role in cold seep ecosystems by contributing to nutrient cycling and supporting diverse microbial and faunal communities.
Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
---|---|---|---|---|---|---|
Archivesica marissinica | Mollusca | Deep-Sea Clam | Hydrothermal vent | 1,361 | Haima cold seep in the South China Sea | 2291877 |
Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
---|---|---|---|---|---|---|---|---|
ASM1484369v1 | 1.5Gb | Chromosome | 2020 | JABXNX01 | Hong Kong Baptist University | PRJNA629898 | 93.50% | 28,949 |
Title | Journal | Pubmed ID |
---|---|---|
Host-Endosymbiont Genome Integration in a Deep-Sea Chemosymbiotic Clam | Molecular Biology and Evolution | 32956455 |
Gene ID | Description |
---|---|
Ama19775 | WNT RELATED |
Ama19776 | WNT RELATED |
Ama19779 | SUPPRESSION OF TUMORIGENICITY 7 |
Ama19781 | THIOREDOXIN-LIKE PROTEN 4A, 4B |
Ama19784 | TRANSLOCON-ASSOCIATED PROTEIN TRAP , GAMMA SUBUNIT |
Ama19785 | |
Ama19786 | COILED-COIL-HELIX-COILED-COIL-HELIX DOMAIN CONTAINING 6 |
Ama19787 | |
Ama19791 | UNCHARACTERIZED |
Ama19793 | HAT FAMILY DIMERISATION DOMAINCONTAINING PROTEIN-RELATED |
Ama19794 | WD REPEAT-CONTAINING PROTEIN 55 |
Ama19795 | PULMONARY SURFACTANT-ASSOCIATED PROTEIN A |
Ama19796 | TESTIS-SPECIFIC GENE 13 PROTEIN |
Ama19798 | |
Ama19800 | CADHERIN-LIKE AND PC-ESTERASE DOMAIN-CONTAINING PROTEIN 1 |
Ama19801 | PROTEIN, PUTATIVE (AFU_ORTHOLOGUE AFUA_5G03330)-RELATED |
Ama19802 | PROTEIN, PUTATIVE (AFU_ORTHOLOGUE AFUA_5G03330)-RELATED |
Ama19803 | |
Ama19806 | |
Ama19807 | |
Ama19808 | PUTATIVE-RELATED |
Ama19809 | |
Ama19811 | |
Ama19812 | |
Ama19813 | ARGININE DEMETHYLASE AND LYSYL-HYDROXYLASE JMJD |
Ama19814 | 52 KDA REPRESSOR OF THE INHIBITOR OF THE PROTEIN KINASE-LIKE PROTEIN-RELATED |
Ama19815 | |
Ama19816 | |
Ama19821 | |
Ama19824 | |
Ama19825 | PLEXIN |
Ama19826 | PLEXIN |
Ama19827 | PLEXIN |
Ama19828 | ZINC KNUCKLE DOMAINCONTAINING PROTEIN-RELATED |
Ama19830 | |
Ama19831 | |
Ama19832 | KIN17 KIN, ANTIGENIC DETERMINANT OF RECA PROTEIN HOMOLOG |
Ama19834 | PLEXIN |
Ama19835 | |
Ama19837 | |
Ama19838 | |
Ama19839 | EXONUCLEASE, PHAGE-TYPE/RECB, C-TERMINAL DOMAIN-CONTAINING PROTEIN |
Ama19840 | ATP-DEPENDENT DNA HELICASE |
Ama19841 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
Ama19842 | |
Ama19843 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
Ama19844 | |
Ama19847 | M-PHASE INDUCER PHOSPHATASE DUAL SPECIFICITY PHOSPHATASE CDC25 |
Ama19848 | M-PHASE INDUCER PHOSPHATASE DUAL SPECIFICITY PHOSPHATASE CDC25 |
Ama19849 | M-PHASE INDUCER PHOSPHATASE DUAL SPECIFICITY PHOSPHATASE CDC25 |