The Deep-Sea Chemosymbiotic Clam Archivesica marissinica is a species of deep-sea clam in the family Vesicomyidae, commonly found at the Haima cold seep on the northwest continental slope of the South China Sea. This species is well-adapted to extreme environments and relies on symbiotic sulfur-oxidizing bacteria housed in its gills for nutrition. Archivesica marissinica plays a significant role in cold seep ecosystems by contributing to nutrient cycling and supporting diverse microbial and faunal communities.
Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
---|---|---|---|---|---|---|
Archivesica marissinica | Mollusca | Deep-Sea Clam | Hydrothermal vent | 1,361 | Haima cold seep in the South China Sea | 2291877 |
Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
---|---|---|---|---|---|---|---|---|
ASM1484369v1 | 1.5Gb | Chromosome | 2020 | JABXNX01 | Hong Kong Baptist University | PRJNA629898 | 93.50% | 28,949 |
Title | Journal | Pubmed ID |
---|---|---|
Host-Endosymbiont Genome Integration in a Deep-Sea Chemosymbiotic Clam | Molecular Biology and Evolution | 32956455 |
Gene ID | Description |
---|---|
Ama19570 | ADENINE NUCLEOTIDE ALPHA HYDROLASES-LIKE SUPERFAMILY PROTEIN |
Ama19571 | RNA POLYMERASE II-ASSOCIATED PROTEIN 3 |
Ama19572 | |
Ama19573 | |
Ama19574 | PROTEASOME SUBUNIT ALPHA/BETA |
Ama19575 | UVRD / RECB / PCRA DNA HELICASE FAMILY MEMBER |
Ama19576 | |
Ama19577 | ZINC FINGER PROTEIN |
Ama19580 | POTE ANKYRIN DOMAIN |
Ama19581 | SEVEN TRANSMEMBRANE PROTEIN 1-RELATED |
Ama19582 | ZYGOTE ARREST PROTEIN 1-LIKE ISOFORM X1 |
Ama19583 | N-LYSINE METHYLTRANSFERASE KMT5A |
Ama19584 | |
Ama19585 | |
Ama19586 | CXC DOMAIN-CONTAINING PROTEIN-RELATED |
Ama19587 | ACROSIN-RELATED |
Ama19588 | |
Ama19589 | NUCLEOREDOXIN-LIKE PROTEIN 2 |
Ama19590 | DNA CROSS-LINK REPAIR PROTEIN PSO2/SNM1-RELATED |
Ama19591 | COMPLEMENT COMPONENT 1, S SUBCOMPONENT-RELATED |
Ama19592 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
Ama19593 | PHAGE_INTEGRASE DOMAIN-CONTAINING PROTEIN |
Ama19594 | |
Ama19595 | OVOCHYMASE-RELATED |
Ama19596 | LITHOSTATHINE |
Ama19597 | |
Ama19598 | |
Ama195_5db7b01a | ANOCTAMIN |
Ama19600 | LITHOSTATHINE |
Ama19601 | |
Ama19602 | |
Ama19603 | |
Ama19604 | |
Ama19605 | INHIBITOR OF APOPTOSIS |
Ama19606 | |
Ama19607 | |
Ama19608 | |
Ama19609 | OTU DOMAIN CONTAINING PROTEIN |
Ama19610 | CCAAT-BINDING TRANSCRIPTION FACTOR-RELATED |
Ama19613 | UNCHARACTERIZED |
Ama19615 | ATP-BINDING CASSETTE TRANSPORTER SUBFAMILY A ABCA |
Ama19616 | ORF PROTEIN |
Ama19617 | E3 UBIQUITIN-PROTEIN LIGASE MIB2 |
Ama19618 | MYOTROPHIN |
Ama19619 | ANKYRIN REPEAT FAMILY PROTEIN |
Ama19620 | ATP-DEPENDENT DNA HELICASE |
Ama19621 | NF-KAPPA-B ESSENTIAL MODULATOR |
Ama19622 | |
Ama19623 | |
Ama19624 |