The Deep-Sea Chemosymbiotic Clam Archivesica marissinica is a species of deep-sea clam in the family Vesicomyidae, commonly found at the Haima cold seep on the northwest continental slope of the South China Sea. This species is well-adapted to extreme environments and relies on symbiotic sulfur-oxidizing bacteria housed in its gills for nutrition. Archivesica marissinica plays a significant role in cold seep ecosystems by contributing to nutrient cycling and supporting diverse microbial and faunal communities.
Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
---|---|---|---|---|---|---|
Archivesica marissinica | Mollusca | Deep-Sea Clam | Hydrothermal vent | 1,361 | Haima cold seep in the South China Sea | 2291877 |
Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
---|---|---|---|---|---|---|---|---|
ASM1484369v1 | 1.5Gb | Chromosome | 2020 | JABXNX01 | Hong Kong Baptist University | PRJNA629898 | 93.50% | 28,949 |
Title | Journal | Pubmed ID |
---|---|---|
Host-Endosymbiont Genome Integration in a Deep-Sea Chemosymbiotic Clam | Molecular Biology and Evolution | 32956455 |
Gene ID | Description |
---|---|
Ama19176 | DYNEIN HEAVY CHAIN 1, AXONEMAL-LIKE PROTEIN |
Ama19177 | DYNEIN HEAVY CHAIN 1, AXONEMAL-LIKE PROTEIN |
Ama19178 | DYNEIN HEAVY CHAIN 1, AXONEMAL-LIKE PROTEIN |
Ama19179 | METALLOPROTEASE |
Ama19180 | |
Ama19181 | FAT ATYPICAL CADHERIN-RELATED |
Ama19182 | |
Ama19185 | |
Ama19186 | KDEL LYS-ASP-GLU-LEU CONTAINING - RELATED |
Ama19187 | CAMK FAMILY PROTEIN KINASE |
Ama19188 | GLUTAMYL-TRNA GLN AMIDOTRANSFERASE SUBUNIT B MITOCHONDRIAL AND PROKARYOTIC PET112-RELATED |
Ama19189 | TRNA (GUANINE-9-) METHYLTRANSFERASE |
Ama19190 | TRNA (GUANINE-9-) METHYLTRANSFERASE |
Ama19191 | TRNA (GUANINE-9-) METHYLTRANSFERASE |
Ama19192 | ZINC FINGER PROTEIN |
Ama19193 | |
Ama19194 | BTB/POZ DOMAIN-CONTAINING |
Ama19195 | SODIUM/CHLORIDE DEPENDENT TRANSPORTER |
Ama19196 | TRANSPOSABLE ELEMENT-RELATED |
Ama19197 | SODIUM/CHLORIDE DEPENDENT TRANSPORTER |
Ama19198 | SODIUM/CHLORIDE DEPENDENT TRANSPORTER |
Ama191_5db7b01a | UBIQUITIN LIGASE SPECIFICITY FACTOR/HREP PROTEIN |
Ama19201 | S-LAYER PROTEIN |
Ama19202 | RAS GTPASE-ACTIVATING PROTEIN-BINDING PROTEIN |
Ama19204 | ATP-BINDING CASSETTE SUB-FAMILY B |
Ama19205 | YY1 ASSOCIATED PROTEIN-RELATED |
Ama19206 | |
Ama19207 | CORRINOID ADENOSYLTRANSFERASE |
Ama19209 | FI04643P-RELATED |
Ama19210 | FI04643P-RELATED |
Ama19211 | THAP DOMAIN PROTEIN |
Ama19212 | EXONUCLEASE, PHAGE-TYPE/RECB, C-TERMINAL DOMAIN-CONTAINING PROTEIN |
Ama19214 | |
Ama19215 | SERINE/THREONINE-PROTEIN KINASE |
Ama19216 | |
Ama19217 | HIGH MOBILITY GROUP PROTEIN DSP1 |
Ama19218 | TESTIS-SPECIFIC Y-ENCODED PROTEIN |
Ama19220 | |
Ama19221 | ALCOHOL O-ACETYLTRANSFERASE 1-RELATED |
Ama19223 | |
Ama19224 | |
Ama19225 | HISTONE-LYSINE N-METHYLTRANSFERASE SUV39H |
Ama19226 | DEATH DOMAIN-CONTAINING PROTEIN CRADD |
Ama19227 | ENOYL-COA HYDRATASE-RELATED |
Ama19228 | 2-OXOGLUTARATE (2OG) AND FE(II)-DEPENDENT OXYGENASE SUPERFAMILY PROTEIN-RELATED |
Ama19230 | |
Ama19232 | FACIOGENITAL DYSPLASIA PROTEIN |
Ama19234 | GTP-BINDING PROTEIN-RELATED |
Ama19235 | RAGULATOR COMPLEX PROTEIN LAMTOR5 |
Ama19236 | COATOMER SUBUNIT GAMMA |