The Deep-Sea Chemosymbiotic Clam Archivesica marissinica is a species of deep-sea clam in the family Vesicomyidae, commonly found at the Haima cold seep on the northwest continental slope of the South China Sea. This species is well-adapted to extreme environments and relies on symbiotic sulfur-oxidizing bacteria housed in its gills for nutrition. Archivesica marissinica plays a significant role in cold seep ecosystems by contributing to nutrient cycling and supporting diverse microbial and faunal communities.
Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
---|---|---|---|---|---|---|
Archivesica marissinica | Mollusca | Deep-Sea Clam | Hydrothermal vent | 1,361 | Haima cold seep in the South China Sea | 2291877 |
Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
---|---|---|---|---|---|---|---|---|
ASM1484369v1 | 1.5Gb | Chromosome | 2020 | JABXNX01 | Hong Kong Baptist University | PRJNA629898 | 93.50% | 28,949 |
Title | Journal | Pubmed ID |
---|---|---|
Host-Endosymbiont Genome Integration in a Deep-Sea Chemosymbiotic Clam | Molecular Biology and Evolution | 32956455 |
Gene ID | Description |
---|---|
Ama19059 | CADHERIN-23 |
Ama19060 | CADHERIN-23 |
Ama19063 | TUMOR SUPPRESSOR CANDIDATE 2 |
Ama19064 | SERINE/THREONINE-PROTEIN KINASE |
Ama19065 | BICAUDAL D FAMILY MEMBER |
Ama19066 | N-TERMINAL ACETYLTRANSFERASE |
Ama19068 | NICOTINAMIDE PHOSPHORIBOSYLTRANSFERASE |
Ama19069 | TUBULIN MONOGLYCYLASE TTLL3 |
Ama19071 | RUNT RELATED |
Ama19073 | |
Ama19074 | |
Ama19075 | |
Ama19076 | DIFFERENTIAL DISPLAY AND ACTIVATED BY P53 DDA3 /G2 S PHASE EXPRESSED 1 |
Ama19077 | |
Ama19078 | LEUCINE DEHYDROGENASE |
Ama19079 | PROTEIN MAELSTROM HOMOLOG |
Ama19080 | |
Ama19081 | |
Ama19082 | |
Ama19083 | |
Ama19084 | MITOCHONDRIAL RIBOSOMAL PROTEIN S33 |
Ama19085 | |
Ama19086 | RECEPTOR-TYPE TYROSINE-PROTEIN PHOSPHATASE |
Ama19087 | RECEPTOR-TYPE TYROSINE-PROTEIN PHOSPHATASE |
Ama19088 | |
Ama19089 | |
Ama19090 | DUAL SPECIFICITY PROTEIN PHOSPHATASE |
Ama19091 | TRNA 5-METHYLAMINOMETHYL-2-THIOURIDYLATE -METHYLTRANSFERASE |
Ama19092 | SOLEUCYL-TRNA SYNTHETASE |
Ama19093 | FERRITIN |
Ama19094 | INTERLEUKIN-17 RECEPTOR |
Ama19095 | F-BOX ONLY PROTEIN 7 |
Ama19096 | ENOLASE (DUF1399) |
Ama19097 | ZINC FINGER PROTEIN |
Ama19098 | |
Ama19099 | TAZ PROTEIN TAFAZZIN |
Ama19100 | TAZ PROTEIN TAFAZZIN |
Ama19103 | |
Ama19104 | |
Ama19105 | |
Ama19106 | |
Ama19107 | |
Ama19109 | COLLAGEN ALPHA |
Ama19110 | GUANYLATE KINASE-RELATED |
Ama19111 | ADP-RIBOSYLGLYCOHYDROLASE |
Ama19112 | NUCLEOTIDE-SUGAR TRANSMEMBRANE TRANSPORTER |
Ama19113 | |
Ama19114 | |
Ama19115 | COLLAGEN IV NC1 DOMAIN-CONTAINING PROTEIN |
Ama19116 | RIBOSOMAL PROTEIN L2 |