The Deep-Sea Chemosymbiotic Clam Archivesica marissinica is a species of deep-sea clam in the family Vesicomyidae, commonly found at the Haima cold seep on the northwest continental slope of the South China Sea. This species is well-adapted to extreme environments and relies on symbiotic sulfur-oxidizing bacteria housed in its gills for nutrition. Archivesica marissinica plays a significant role in cold seep ecosystems by contributing to nutrient cycling and supporting diverse microbial and faunal communities.
Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
---|---|---|---|---|---|---|
Archivesica marissinica | Mollusca | Deep-Sea Clam | Hydrothermal vent | 1,361 | Haima cold seep in the South China Sea | 2291877 |
Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
---|---|---|---|---|---|---|---|---|
ASM1484369v1 | 1.5Gb | Chromosome | 2020 | JABXNX01 | Hong Kong Baptist University | PRJNA629898 | 93.50% | 28,949 |
Title | Journal | Pubmed ID |
---|---|---|
Host-Endosymbiont Genome Integration in a Deep-Sea Chemosymbiotic Clam | Molecular Biology and Evolution | 32956455 |
Gene ID | Description |
---|---|
Ama18706 | - |
Ama18707 | |
Ama18708 | OPSIN |
Ama18709 | 5-HYDROXYTRYPTAMINE RECEPTOR |
Ama18710 | |
Ama18711 | CHLORIDE CHANNEL PROTEIN CLC FAMILY MEMBER |
Ama18712 | RNA RECOGNITION MOTIF-CONTAINING |
Ama18713 | ELKS/RAB6-INTERACTING/CAST PROTEIN |
Ama18716 | |
Ama18717 | DNA REPAIR AND RECOMBINATION PROTEIN RAD52, RAD59 |
Ama18719 | EGF-LIKE DOMAIN-CONTAINING PROTEIN |
Ama18720 | LIPOMA HMGIC FUSION PARTNER-LIKE PROTEIN |
Ama18721 | |
Ama18722 | LIPOMA HMGIC FUSION PARTNER-LIKE PROTEIN |
Ama18724 | ORIGIN RECOGNITION COMPLEX SUBUNIT 5 |
Ama18725 | ORIGIN RECOGNITION COMPLEX SUBUNIT 5 |
Ama18726 | ORIGIN RECOGNITION COMPLEX SUBUNIT 5 |
Ama18727 | REELIN |
Ama18728 | REELIN |
Ama18730 | REELIN |
Ama18732 | REELIN |
Ama18733 | REELIN |
Ama18734 | |
Ama18735 | MEMBRANE ASSOCIATED GUANYLATE KINASE-RELATED |
Ama18736 | MEMBRANE ASSOCIATED GUANYLATE KINASE-RELATED |
Ama18737 | MEMBRANE ASSOCIATED GUANYLATE KINASE-RELATED |
Ama18738 | |
Ama18739 | MEMBRANE ASSOCIATED GUANYLATE KINASE-RELATED |
Ama18740 | PROTON MYO-INOSITOL COTRANSPORTER |
Ama18741 | |
Ama18744 | STROMAL CELL-DERIVED FACTOR 2-LIKE PROTEIN |
Ama18745 | ATP-BINDING CASSETTE, SUB-FAMILY D MEMBER |
Ama18746 | |
Ama18747 | |
Ama18748 | CEREBLON |
Ama18749 | DNAJ HOMOLOG SUBFAMILY B MEMBER 9 |
Ama18750 | GLYCERATE KINASE |
Ama18751 | PIGGYBAC TRANSPOSABLE ELEMENT-DERIVED PROTEIN 4 |
Ama18753 | PHD FINGER PROTEINS |
Ama18754 | ADAMTS A DISINTEGRIN AND METALLOPROTEASE WITH THROMBOSPONDIN MOTIFS PROTEASE |
Ama18756 | SAND PROTEIN-RELATED |
Ama18757 | TRANSPOSON |
Ama18758 | INOSITOL POLYPHOSPHATE KINASE 1 |
Ama18759 | ENDONUCLEASE-RELATED |
Ama18760 | ACTIN |
Ama18761 | PROTEIN PHOSPHATASE 2C |
Ama18762 | WD40 REPEAT PROTEIN SWD2 |
Ama18764 | |
Ama18765 | |
Ama18766 |