The Deep-Sea Chemosymbiotic Clam Archivesica marissinica is a species of deep-sea clam in the family Vesicomyidae, commonly found at the Haima cold seep on the northwest continental slope of the South China Sea. This species is well-adapted to extreme environments and relies on symbiotic sulfur-oxidizing bacteria housed in its gills for nutrition. Archivesica marissinica plays a significant role in cold seep ecosystems by contributing to nutrient cycling and supporting diverse microbial and faunal communities.
Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
---|---|---|---|---|---|---|
Archivesica marissinica | Mollusca | Deep-Sea Clam | Hydrothermal vent | 1,361 | Haima cold seep in the South China Sea | 2291877 |
Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
---|---|---|---|---|---|---|---|---|
ASM1484369v1 | 1.5Gb | Chromosome | 2020 | JABXNX01 | Hong Kong Baptist University | PRJNA629898 | 93.50% | 28,949 |
Title | Journal | Pubmed ID |
---|---|---|
Host-Endosymbiont Genome Integration in a Deep-Sea Chemosymbiotic Clam | Molecular Biology and Evolution | 32956455 |
Gene ID | Description |
---|---|
Ama18467 | |
Ama18468 | |
Ama18469 | |
Ama18470 | BCR-ASSOCIATED PROTEIN, BAP |
Ama18471 | NITRIC OXIDE SYNTHASE OXYGENASE |
Ama18472 | NITRIC OXIDE SYNTHASE OXYGENASE |
Ama18476 | NITRIC OXIDE SYNTHASE OXYGENASE |
Ama18477 | RNA-BINDING PROTEIN |
Ama18478 | DYNAMIN |
Ama18479 | SULFATASE MODIFYING FACTOR 1, 2 |
Ama18480 | N-ACETYLGALACTOSAMINYLTRANSFERASE |
Ama18481 | WD REPEAT PROTEIN 8-RELATED |
Ama18482 | |
Ama18483 | METHYLTRANSFERASE |
Ama18484 | |
Ama18486 | - |
Ama18487 | |
Ama18488 | 52 KDA REPRESSOR OF THE INHIBITOR OF THE PROTEIN KINASE-LIKE PROTEIN-RELATED |
Ama18489 | AP ENDONUCLEASE |
Ama18490 | LAMINA-ASSOCIATED POLYPEPTIDE THYMOPOIETIN |
Ama18491 | RAS-ASSOCIATING DOMAIN-CONTAINING PROTEIN |
Ama18493 | |
Ama18499 | SMARCE1 REGULATOR OF CHROMATIN |
Ama18501 | |
Ama18504 | SMARCE1 REGULATOR OF CHROMATIN |
Ama18505 | RAS-ASSOCIATING DOMAIN-CONTAINING PROTEIN |
Ama18506 | HISTONE H4 TRANSCRIPTION FACTOR-RELATED |
Ama18509 | TRANSPOSON |
Ama18510 | |
Ama18511 | ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN |
Ama18512 | LP04239P |
Ama18514 | PYRUVATE DEHYDROGENASE KINASE |
Ama18515 | UNCHARACTERIZED |
Ama18516 | |
Ama18517 | |
Ama18518 | PROTEIN CBG03580 |
Ama18519 | M-PHASE INDUCER PHOSPHATASE DUAL SPECIFICITY PHOSPHATASE CDC25 |
Ama18521 | |
Ama18522 | REVERSE TRANSCRIPTASES |
Ama18523 | ADENINE NUCLEOTIDE ALPHA HYDROLASES-LIKE SUPERFAMILY PROTEIN |
Ama18524 | |
Ama18525 | ALPHA-TOCOPHEROL TRANSFER PROTEIN-RELATED |
Ama18526 | UNCHARACTERIZED |
Ama18528 | |
Ama18529 | |
Ama18530 | |
Ama18531 | PROTON MYO-INOSITOL COTRANSPORTER |
Ama18532 | EXONUCLEASE, PHAGE-TYPE/RECB, C-TERMINAL DOMAIN-CONTAINING PROTEIN |
Ama18533 | THAP DOMAIN PROTEIN |
Ama18534 | NUCLEAR FACTOR INTERLEUKIN-3-REGULATED PROTEIN |