The Deep-Sea Chemosymbiotic Clam Archivesica marissinica is a species of deep-sea clam in the family Vesicomyidae, commonly found at the Haima cold seep on the northwest continental slope of the South China Sea. This species is well-adapted to extreme environments and relies on symbiotic sulfur-oxidizing bacteria housed in its gills for nutrition. Archivesica marissinica plays a significant role in cold seep ecosystems by contributing to nutrient cycling and supporting diverse microbial and faunal communities.
Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
---|---|---|---|---|---|---|
Archivesica marissinica | Mollusca | Deep-Sea Clam | Hydrothermal vent | 1,361 | Haima cold seep in the South China Sea | 2291877 |
Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
---|---|---|---|---|---|---|---|---|
ASM1484369v1 | 1.5Gb | Chromosome | 2020 | JABXNX01 | Hong Kong Baptist University | PRJNA629898 | 93.50% | 28,949 |
Title | Journal | Pubmed ID |
---|---|---|
Host-Endosymbiont Genome Integration in a Deep-Sea Chemosymbiotic Clam | Molecular Biology and Evolution | 32956455 |
Gene ID | Description |
---|---|
Ama18634 | RIBITOL-5-PHOSPHATE XYLOSYLTRANSFERASE 1 |
Ama18638 | THUMP DOMAIN-CONTAINING |
Ama18639 | |
Ama18640 | DNA CROSS-LINK REPAIR PROTEIN PSO2/SNM1-RELATED |
Ama18641 | UNCHARACTERIZED |
Ama18642 | |
Ama18643 | UNCHARACTERIZED |
Ama18647 | EGF-LIKE DOMAIN-CONTAINING PROTEIN |
Ama18648 | ANKYRIN REPEAT FAMILY PROTEIN |
Ama18649 | UNCHARACTERIZED PROTEIN C17ORF53 HOMOLOG |
Ama18651 | EUKARYOTIC TRANSLATION INITIATION FACTOR 4E RELATED |
Ama18652 | PROTEIN CBG26694 |
Ama18653 | SMALL INTEGRAL MEMBRANE PROTEIN 30 |
Ama18654 | HISTIDINE AMMONIA-LYASE |
Ama18658 | ELECTRON TRANSPORT OXIDOREDUCTASE |
Ama18659 | GLUTATHIONE S-TRANSFERASE |
Ama18660 | INTERFERON-RELATED DEVELOPMENTAL REGULATOR |
Ama18661 | HAUS AUGMIN-LIKE COMPLEX SUBUNIT 7 |
Ama18662 | METABOTROPIC GLUTAMATE RECEPTOR |
Ama18664 | PICCOLO/BASSOON |
Ama18665 | |
Ama18666 | |
Ama18667 | |
Ama18668 | PLEXIN |
Ama18669 | |
Ama18670 | |
Ama18671 | GUANYLYL CYCLASE |
Ama18672 | LATROPHILIN RECEPTOR-LIKE PROTEIN A |
Ama18673 | |
Ama18676 | ADHESION G PROTEIN-COUPLED RECEPTOR G7 |
Ama18679 | CADHERIN-23 |
Ama18680 | CADHERIN-23 |
Ama18681 | FAT ATYPICAL CADHERIN-RELATED |
Ama18682 | CADHERIN-23 |
Ama18683 | GTP-BINDING PROTEIN ALPHA SUBUNIT |
Ama18684 | |
Ama18687 | PUTATIVE-RELATED |
Ama18688 | LEUKOTRIENE A-4 HYDROLASE |
Ama18690 | |
Ama18691 | MITOGEN-ACTIVATED PROTEIN KINASE KINASE KINASE 7-RELATED |
Ama18692 | KELCH PROTEIN |
Ama18693 | CAMK FAMILY PROTEIN KINASE |
Ama18695 | |
Ama18696 | UNCHARACTERIZED |
Ama18697 | KELCH PROTEIN |
Ama18698 | |
Ama18701 | INHIBITOR OF GROWTH PROTEIN |
Ama18703 | |
Ama18704 | |
Ama18705 |