The Deep-Sea Chemosymbiotic Clam Archivesica marissinica is a species of deep-sea clam in the family Vesicomyidae, commonly found at the Haima cold seep on the northwest continental slope of the South China Sea. This species is well-adapted to extreme environments and relies on symbiotic sulfur-oxidizing bacteria housed in its gills for nutrition. Archivesica marissinica plays a significant role in cold seep ecosystems by contributing to nutrient cycling and supporting diverse microbial and faunal communities.
Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
---|---|---|---|---|---|---|
Archivesica marissinica | Mollusca | Deep-Sea Clam | Hydrothermal vent | 1,361 | Haima cold seep in the South China Sea | 2291877 |
Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
---|---|---|---|---|---|---|---|---|
ASM1484369v1 | 1.5Gb | Chromosome | 2020 | JABXNX01 | Hong Kong Baptist University | PRJNA629898 | 93.50% | 28,949 |
Title | Journal | Pubmed ID |
---|---|---|
Host-Endosymbiont Genome Integration in a Deep-Sea Chemosymbiotic Clam | Molecular Biology and Evolution | 32956455 |
Gene ID | Description |
---|---|
Ama18767 | ZINC FINGER PROTEIN |
Ama18768 | METHYL-CPG BINDING PROTEIN, DROSOPHILA |
Ama18771 | B-CELL TRANSLOCATION GENE |
Ama18773 | PROTEIN REQUIRED FOR HYPHAL ANASTOMOSIS HAM-2 |
Ama18774 | INTER-ALPHA-TRYPSIN INHIBITOR HEAVY CHAIN FAMILY MEMBER |
Ama18775 | |
Ama18777 | - |
Ama18778 | |
Ama18779 | CXC DOMAIN-CONTAINING PROTEIN-RELATED |
Ama18780 | |
Ama18781 | |
Ama18782 | GUANYLYL CYCLASE |
Ama18783 | G-PROTEIN COUPLED RECEPTOR |
Ama18784 | G-PROTEIN COUPLED RECEPTOR |
Ama18785 | EXONUCLEASE, PHAGE-TYPE/RECB, C-TERMINAL DOMAIN-CONTAINING PROTEIN |
Ama18786 | |
Ama18787 | TYROSINE-PROTEIN KINASE RECEPTOR |
Ama18788 | |
Ama18789 | SPROUTY-RELATED, EVH1 DOMAIN-CONTAINING PROTEIN FAMILY MEMBER |
Ama18790 | |
Ama18791 | |
Ama18792 | MAP/MICROTUBULE AFFINITY-REGULATING KINASE |
Ama18796 | SPROUTY-RELATED, EVH1 DOMAIN-CONTAINING PROTEIN FAMILY MEMBER |
Ama18797 | SACCHAROPINE DEHYDROGENASE |
Ama187_5db7b01a | SER/THR PROTEIN KINASE-TRB |
Ama18801 | UBIQUITIN-ACTIVATING ENZYME E1 |
Ama18802 | PPP4R2-RELATED PROTEIN |
Ama18803 | TRANSCRIPTASE, PUTATIVE-RELATED-RELATED |
Ama18804 | |
Ama18805 | |
Ama18809 | SHISA |
Ama18810 | |
Ama18811 | VILLIN |
Ama18813 | RNA POLYMERASE II TRANSCRIPTIONAL COACTIVATOR |
Ama18814 | INHIBITOR OF APOPTOSIS |
Ama18815 | |
Ama18816 | INHIBITOR OF APOPTOSIS |
Ama18818 | CDP-DIACYLGLYCEROL--GLYCEROL-3-PHOSPHATE 3-PHOSPHATIDYLTRANSFERASE-RELATED |
Ama18822 | VOLTAGE-DEPENDENT CALCIUM CHANNEL TYPE A SUBUNIT ALPHA-1 |
Ama18825 | |
Ama18826 | |
Ama18827 | |
Ama18828 | RAS-ASSOCIATING DOMAIN-CONTAINING PROTEIN |
Ama18830 | VOLTAGE-DEPENDENT CALCIUM CHANNEL SUBUNIT ALPHA-2/DELTA-RELATED |
Ama18833 | |
Ama18834 | LIM DOMAIN-CONTAINING PROTEIN |
Ama18835 | MIP04163P |
Ama18836 | G PATCH AND KOW-CONTAINING |
Ama18837 | DED DOMAIN-CONTAINING PROTEIN |
Ama18838 | DED DOMAIN-CONTAINING PROTEIN |