The Deep-Sea Chemosymbiotic Clam Archivesica marissinica is a species of deep-sea clam in the family Vesicomyidae, commonly found at the Haima cold seep on the northwest continental slope of the South China Sea. This species is well-adapted to extreme environments and relies on symbiotic sulfur-oxidizing bacteria housed in its gills for nutrition. Archivesica marissinica plays a significant role in cold seep ecosystems by contributing to nutrient cycling and supporting diverse microbial and faunal communities.
Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
---|---|---|---|---|---|---|
Archivesica marissinica | Mollusca | Deep-Sea Clam | Hydrothermal vent | 1,361 | Haima cold seep in the South China Sea | 2291877 |
Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
---|---|---|---|---|---|---|---|---|
ASM1484369v1 | 1.5Gb | Chromosome | 2020 | JABXNX01 | Hong Kong Baptist University | PRJNA629898 | 93.50% | 28,949 |
Title | Journal | Pubmed ID |
---|---|---|
Host-Endosymbiont Genome Integration in a Deep-Sea Chemosymbiotic Clam | Molecular Biology and Evolution | 32956455 |
Gene ID | Description |
---|---|
Ama18392 | RAS-ASSOCIATING DOMAIN-CONTAINING PROTEIN |
Ama18393 | RNA POLYMERASE II TRANSCRIPTIONAL COACTIVATOR |
Ama18394 | INHIBITOR OF APOPTOSIS |
Ama18395 | RNA POLYMERASE II TRANSCRIPTIONAL COACTIVATOR |
Ama18396 | GLYCOSIDASE FAMILY 31 |
Ama18397 | |
Ama18398 | KNIRPS-RELATED PROTEIN-RELATED |
Ama18399 | NUCLEAR RECEPTOR SUBFAMILY 0 GROUP B |
Ama183_5db7b01a | E3 UBIQUITIN-PROTEIN LIGASE RNF26 |
Ama18400 | |
Ama18402 | |
Ama18403 | PHYTANOYL-COA ALPHA-HYDROXYLASE |
Ama18404 | NUCLEAR RESPIRATORY FACTOR 1 |
Ama18409 | PROTEIN SIDEKICK |
Ama18410 | 6-PHOSPHOFRUCTO-2-KINASE/FRUCTOSE-2,6-BISPHOSPHATASE |
Ama18411 | O-ACYLTRANSFERASE |
Ama18413 | |
Ama18414 | HIV-INDUCED PROTEIN-7-LIKE PROTEASE |
Ama18415 | UDP/ADP-SUGAR PYROPHOSPHATASE |
Ama18416 | |
Ama18417 | MITOGEN-ACTIVATED PROTEIN KINASE KINASE KINASE 7-RELATED |
Ama18418 | MITOGEN-ACTIVATED PROTEIN KINASE KINASE KINASE 7-RELATED |
Ama18419 | 52 KDA REPRESSOR OF THE INHIBITOR OF THE PROTEIN KINASE-LIKE PROTEIN-RELATED |
Ama18420 | FMRFAMIDE RECEPTOR-RELATED |
Ama18421 | TOL-PAL SYSTEM PROTEIN TOLA |
Ama18426 | GENERAL TRANSCRIPTION FACTOR 3C POLYPEPTIDE 1 |
Ama18431 | 2-AMINOMUCONIC SEMIALDEHYDE DEHYDROGENASE |
Ama18434 | OS06G0237300 PROTEIN |
Ama18437 | SELENIDE, WATER DIKINASE |
Ama18439 | UBX-RELATED |
Ama18440 | |
Ama18441 | SIMILAR TO RIKEN CDNA 6430571L13 GENE, SIMILAR TO G20 PROTEIN |
Ama18442 | 52 KDA REPRESSOR OF THE INHIBITOR OF THE PROTEIN KINASE-LIKE PROTEIN-RELATED |
Ama18444 | VPRBP PROTEIN-RELATED |
Ama18445 | VPRBP PROTEIN-RELATED |
Ama18446 | VPRBP PROTEIN-RELATED |
Ama18447 | ENOLASE (DUF1399) |
Ama18451 | |
Ama18452 | STABILIN |
Ama18453 | SUGAR-1-PHOSPHATE GUANYL TRANSFERASE |
Ama18454 | |
Ama18455 | |
Ama18456 | ZGC:195170 |
Ama18457 | |
Ama18459 | HISTONE-LYSINE N-METHYLTRANSFERASE E(Z) |
Ama18461 | TRANSMEMBRANE PROTEIN 168 |
Ama18462 | N-FATTY-ACYL-AMINO ACID SYNTHASE/HYDROLASE PM20D1 |
Ama18463 | |
Ama18464 | |
Ama18466 |