The Deep-Sea Chemosymbiotic Clam Archivesica marissinica is a species of deep-sea clam in the family Vesicomyidae, commonly found at the Haima cold seep on the northwest continental slope of the South China Sea. This species is well-adapted to extreme environments and relies on symbiotic sulfur-oxidizing bacteria housed in its gills for nutrition. Archivesica marissinica plays a significant role in cold seep ecosystems by contributing to nutrient cycling and supporting diverse microbial and faunal communities.
Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
---|---|---|---|---|---|---|
Archivesica marissinica | Mollusca | Deep-Sea Clam | Hydrothermal vent | 1,361 | Haima cold seep in the South China Sea | 2291877 |
Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
---|---|---|---|---|---|---|---|---|
ASM1484369v1 | 1.5Gb | Chromosome | 2020 | JABXNX01 | Hong Kong Baptist University | PRJNA629898 | 93.50% | 28,949 |
Title | Journal | Pubmed ID |
---|---|---|
Host-Endosymbiont Genome Integration in a Deep-Sea Chemosymbiotic Clam | Molecular Biology and Evolution | 32956455 |
Gene ID | Description |
---|---|
Ama18136 | ZINC FINGER PROTEIN 142 |
Ama18137 | |
Ama18139 | - |
Ama18141 | MUCIN-19 |
Ama18144 | ZINC FINGER PROTEIN |
Ama18147 | ANKYRIN REPEAT-CONTAINING |
Ama18148 | SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE |
Ama18149 | ENGULFMENT AND CELL MOTILITY |
Ama18150 | |
Ama18151 | |
Ama18152 | DYNEIN LIGHT CHAIN ROADBLOCK |
Ama18153 | REPRESSOR OF RNA POLYMERASE III TRANSCRIPTION MAF1 |
Ama18154 | UBIQUITIN CONJUGATING ENZYME 7 INTERACTING PROTEIN-RELATED |
Ama18155 | NON-SPECIFIC SERINE/THREONINE PROTEIN KINASE |
Ama18156 | PHOSPHATIDYLETHANOLAMINE-BINDING PROTEIN |
Ama18157 | |
Ama18158 | CCAAT/ENHANCER BINDING PROTEIN |
Ama18159 | CCAAT/ENHANCER BINDING PROTEIN |
Ama18161 | |
Ama18162 | DNA REPAIR-SCAFFOLDING PROTEIN SPIDR |
Ama18163 | ENHANCER OF MRNA-DECAPPING PROTEIN 4 |
Ama18164 | MASK PROTEIN |
Ama18165 | ANAMORSIN |
Ama18166 | TARGETING PROTEIN FOR XKLP2 |
Ama18167 | PROTEASOME ASSEMBLY CHAPERONE 2 |
Ama18168 | ZINC FINGER PROTEIN |
Ama18169 | 3-HYDROXYISOBUTYRATE DEHYDROGENASE-RELATED |
Ama18170 | CYTOCHROME P450 FAMILY 4 |
Ama18171 | HEPARAN SULFATE SULFOTRANSFERASE |
Ama18172 | ZINC KNUCKLE DOMAINCONTAINING PROTEIN-RELATED |
Ama18173 | |
Ama18174 | |
Ama18175 | PROTEIN FAM167A |
Ama18176 | SCHLAFEN |
Ama18177 | |
Ama18178 | ZINC FINGER PROTEIN |
Ama18179 | DNA POLYMERASE |
Ama18180 | HEH2P |
Ama18181 | PUTATIVE-RELATED |
Ama18182 | PUTATIVE-RELATED |
Ama18183 | |
Ama18184 | PHD-TYPE DOMAIN-CONTAINING PROTEIN |
Ama18185 | PHD-TYPE DOMAIN-CONTAINING PROTEIN |
Ama18186 | SET DOMAIN-CONTAINING PROTEIN-RELATED |
Ama18187 | SET DOMAIN-CONTAINING PROTEIN-RELATED |
Ama18188 | PHD-TYPE DOMAIN-CONTAINING PROTEIN |
Ama18189 | |
Ama18190 | FIBRONECTIN TYPE-III DOMAIN-CONTAINING PROTEIN-RELATED |
Ama18192 | COILED-COIL DOMAIN-CONTAINING PROTEIN 180 |
Ama18194 |