The Deep-Sea Chemosymbiotic Clam Archivesica marissinica is a species of deep-sea clam in the family Vesicomyidae, commonly found at the Haima cold seep on the northwest continental slope of the South China Sea. This species is well-adapted to extreme environments and relies on symbiotic sulfur-oxidizing bacteria housed in its gills for nutrition. Archivesica marissinica plays a significant role in cold seep ecosystems by contributing to nutrient cycling and supporting diverse microbial and faunal communities.
Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
---|---|---|---|---|---|---|
Archivesica marissinica | Mollusca | Deep-Sea Clam | Hydrothermal vent | 1,361 | Haima cold seep in the South China Sea | 2291877 |
Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
---|---|---|---|---|---|---|---|---|
ASM1484369v1 | 1.5Gb | Chromosome | 2020 | JABXNX01 | Hong Kong Baptist University | PRJNA629898 | 93.50% | 28,949 |
Title | Journal | Pubmed ID |
---|---|---|
Host-Endosymbiont Genome Integration in a Deep-Sea Chemosymbiotic Clam | Molecular Biology and Evolution | 32956455 |
Gene ID | Description |
---|---|
Ama17875 | PROTEIN DR1 |
Ama17877 | |
Ama17878 | |
Ama17879 | SPHINGOMYELIN PHOSPHODIESTERASE |
Ama17880 | |
Ama17881 | SPHINGOMYELIN PHOSPHODIESTERASE |
Ama17882 | PROTEIN TORNADO 1 |
Ama17883 | |
Ama17884 | |
Ama17894 | |
Ama17895 | EXONUCLEASE, PHAGE-TYPE/RECB, C-TERMINAL DOMAIN-CONTAINING PROTEIN |
Ama17896 | THAP DOMAIN PROTEIN |
Ama17899 | THAP DOMAIN PROTEIN |
Ama178_5db7b01a | |
Ama17900 | EXONUCLEASE, PHAGE-TYPE/RECB, C-TERMINAL DOMAIN-CONTAINING PROTEIN |
Ama17901 | |
Ama17902 | |
Ama17905 | |
Ama17907 | |
Ama17908 | VITELLOGENIN RECEPTOR-LIKE PROTEIN-RELATED-RELATED |
Ama17909 | VITELLOGENIN RECEPTOR-LIKE PROTEIN-RELATED-RELATED |
Ama17910 | VITELLOGENIN RECEPTOR-LIKE PROTEIN-RELATED-RELATED |
Ama17911 | RAW, ISOFORM A |
Ama17912 | SODIUM-COUPLED MONOCARBOXYLATE TRANSPORTER |
Ama17913 | PERIAXIN-LIKE |
Ama17914 | FORKHEAD BOX PROTEIN |
Ama17915 | CXC DOMAIN-CONTAINING PROTEIN-RELATED |
Ama17916 | GDP-MANNOSE 4,6-DEHYDRATASE |
Ama17917 | SAM-DOMAIN, SH3 AND NUCLEAR LOCALIZATION SIGNALS PROTEIN RELATED |
Ama17918 | |
Ama17920 | |
Ama17921 | |
Ama17923 | PHAGE_INTEGRASE DOMAIN-CONTAINING PROTEIN |
Ama17924 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
Ama17925 | |
Ama17927 | MITOCHONDRIAL RIBOSOMAL PROTEIN S18 |
Ama17928 | COPINE |
Ama17929 | G-PROTEIN COUPLED RECEPTOR |
Ama17930 | SORTING NEXIN 20, 21 |
Ama17931 | POLY(A) RNA POLYMERASE |
Ama17932 | N-ACETYLGLUCOSAMINE-1-PHOSPHODIESTER ALPHA-N-ACETYLGLUCOSAMINIDASE |
Ama17933 | DNA-DIRECTED RNA POLYMERASE |
Ama17934 | RIBONUCLEASE P PROTEIN SUBUNIT P40 |
Ama17935 | LEUCYL-TRNA SYNTHETASE |
Ama17936 | ATAXIN 1 |
Ama17937 | TRANSLOCON-ASSOCIATED PROTEIN, ALPHA SUBUNIT |
Ama17938 | |
Ama17939 | PHOSPHORYLATED CTD INTERACTING FACTOR 1 |
Ama17940 | EUKARYOTIC TRANSLATION INITIATION FACTOR |
Ama17941 |