The Deep-Sea Chemosymbiotic Clam Archivesica marissinica is a species of deep-sea clam in the family Vesicomyidae, commonly found at the Haima cold seep on the northwest continental slope of the South China Sea. This species is well-adapted to extreme environments and relies on symbiotic sulfur-oxidizing bacteria housed in its gills for nutrition. Archivesica marissinica plays a significant role in cold seep ecosystems by contributing to nutrient cycling and supporting diverse microbial and faunal communities.
Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
---|---|---|---|---|---|---|
Archivesica marissinica | Mollusca | Deep-Sea Clam | Hydrothermal vent | 1,361 | Haima cold seep in the South China Sea | 2291877 |
Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
---|---|---|---|---|---|---|---|---|
ASM1484369v1 | 1.5Gb | Chromosome | 2020 | JABXNX01 | Hong Kong Baptist University | PRJNA629898 | 93.50% | 28,949 |
Title | Journal | Pubmed ID |
---|---|---|
Host-Endosymbiont Genome Integration in a Deep-Sea Chemosymbiotic Clam | Molecular Biology and Evolution | 32956455 |
Gene ID | Description |
---|---|
Ama17598 | |
Ama17599 | CHRONIC MYELOGENOUS LEUKEMIA TUMOR ANTIGEN 66 |
Ama175_5db7b01a | RING/U-BOX SUPERFAMILY PROTEIN |
Ama17600 | REVERSE TRANSCRIPTASES |
Ama17601 | |
Ama17602 | PHD-TYPE DOMAIN-CONTAINING PROTEIN |
Ama17603 | |
Ama17605 | SOLUTE CARRIER FAMILY 52 |
Ama17606 | ZINC FINGER PROTEIN 200 |
Ama17609 | CCR4-NOT TRANSCRIPTION COMPLEX |
Ama17610 | CCR4-NOT TRANSCRIPTION COMPLEX |
Ama17611 | BONUS, ISOFORM C-RELATED |
Ama17612 | SODIUM/CHLORIDE DEPENDENT TRANSPORTER |
Ama17614 | |
Ama17615 | CCR4-NOT TRANSCRIPTION COMPLEX |
Ama17617 | |
Ama17618 | TRANSPOSABLE ELEMENT-RELATED |
Ama17619 | |
Ama17620 | GLOMULIN |
Ama17621 | UBIQUINONE BIOSYNTHESIS PROTEIN COQ9, MITOCHONDRIAL |
Ama17623 | EUKARYOTIC ELONGATION FACTOR 2 KINASE-RELATED |
Ama17625 | |
Ama17626 | |
Ama17627 | |
Ama17629 | |
Ama17630 | FATTY ACID HYDROXYLASE |
Ama17632 | POLYAMINE-MODULATED FACTOR 1-BINDING PROTEIN 1-RELATED |
Ama17633 | |
Ama17637 | CXC DOMAIN-CONTAINING PROTEIN-RELATED |
Ama17638 | ZINC FINGER HOMEOBOX PROTEIN |
Ama17639 | ZINC FINGER HOMEOBOX PROTEIN |
Ama17641 | ALPHA KINASE/ELONGATION FACTOR 2 KINASE |
Ama17642 | TRANSCRIPTIONAL ACTIVATOR CUBITUS INTERRUPTUS |
Ama17643 | THIAMINE-TRIPHOSPHATASE |
Ama17644 | FIBRONECTIN TYPE-III DOMAIN-CONTAINING PROTEIN-RELATED |
Ama17647 | GATOR COMPLEX PROTEIN WDR59 |
Ama17648 | GATOR COMPLEX PROTEIN WDR59 |
Ama17649 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
Ama17650 | |
Ama17651 | KREV INTERACTION TRAPPED 1-RELATED |
Ama17652 | PHOSPHOLIPID ACYLTRANSFERASE |
Ama17653 | CENTROMERE PROTEIN L |
Ama17654 | RNA-BINDING (RRM/RBD/RNP MOTIFS) FAMILY PROTEIN |
Ama17655 | RNA-BINDING (RRM/RBD/RNP MOTIFS) FAMILY PROTEIN |
Ama17656 | ZINC FINGER PROTEIN |
Ama17657 | CHLOROPHYLLASE-2, CHLOROPLASTIC |
Ama17658 | CHLOROPHYLLASE-2, CHLOROPLASTIC |
Ama17659 | CHROMOSOME 20 ORF85 FAMILY MEMBER |
Ama17660 | |
Ama17661 | U3 SMALL NUCLEOLAR RNA-ASSOCIATED PROTEIN 4 HOMOLOG |