The Deep-Sea Chemosymbiotic Clam Archivesica marissinica is a species of deep-sea clam in the family Vesicomyidae, commonly found at the Haima cold seep on the northwest continental slope of the South China Sea. This species is well-adapted to extreme environments and relies on symbiotic sulfur-oxidizing bacteria housed in its gills for nutrition. Archivesica marissinica plays a significant role in cold seep ecosystems by contributing to nutrient cycling and supporting diverse microbial and faunal communities.
Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
---|---|---|---|---|---|---|
Archivesica marissinica | Mollusca | Deep-Sea Clam | Hydrothermal vent | 1,361 | Haima cold seep in the South China Sea | 2291877 |
Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
---|---|---|---|---|---|---|---|---|
ASM1484369v1 | 1.5Gb | Chromosome | 2020 | JABXNX01 | Hong Kong Baptist University | PRJNA629898 | 93.50% | 28,949 |
Title | Journal | Pubmed ID |
---|---|---|
Host-Endosymbiont Genome Integration in a Deep-Sea Chemosymbiotic Clam | Molecular Biology and Evolution | 32956455 |
Gene ID | Description |
---|---|
Ama17412 | PIGGYBAC TRANSPOSABLE ELEMENT-DERIVED PROTEIN 4 |
Ama17413 | |
Ama17415 | THROMBOSPONDIN |
Ama17416 | SET DOMAIN-CONTAINING PROTEIN-RELATED |
Ama17417 | UNCHARACTERIZED |
Ama17418 | |
Ama17419 | 3-OXOACYL-(ACYL-CARRIER-PROTEIN) REDUCTASE |
Ama17420 | RAS-ASSOCIATING DOMAIN-CONTAINING PROTEIN |
Ama17421 | |
Ama17422 | KELCH DOMAIN-CONTAINING PROTEIN 10 |
Ama17423 | RAS-ASSOCIATING DOMAIN-CONTAINING PROTEIN |
Ama17425 | PEPTIDASE |
Ama17426 | |
Ama17427 | SET DOMAIN-CONTAINING PROTEIN-RELATED |
Ama17429 | SET DOMAIN-CONTAINING PROTEIN-RELATED |
Ama17431 | ATP-DEPENDENT PERMEASE MDL1, MITOCHONDRIAL |
Ama17432 | |
Ama17433 | |
Ama17434 | ATP-BINDING CASSETTE SUB-FAMILY B |
Ama17435 | ZINC METALLOPROTEASE FAMILY M13 NEPRILYSIN-RELATED |
Ama17436 | SHC (SRC HOMOLOGY DOMAIN C-TERMINAL) ADAPTOR HOMOLOG |
Ama17437 | |
Ama17438 | CARBOHYDRATE SULFOTRANSFERASE 15 |
Ama17439 | ALPHA KINASE/ELONGATION FACTOR 2 KINASE |
Ama17440 | |
Ama17441 | ALPHA KINASE/ELONGATION FACTOR 2 KINASE |
Ama17442 | PHOSPHATIDYLINOSITIDE PHOSPHATASE SAC1 |
Ama17443 | INTEGRASE CATALYTIC DOMAIN-CONTAINING PROTEIN |
Ama17445 | |
Ama17447 | |
Ama17449 | |
Ama17450 | PALMITOYLTRANSFERASE ZDHHC16 |
Ama17451 | |
Ama17452 | POTASSIUM CHANNEL TETRAMERIZATION DOMAIN-CONTAINING |
Ama17453 | |
Ama17454 | G-PROTEIN COUPLED RECEPTOR 158-RELATED |
Ama17456 | |
Ama17457 | G-PROTEIN COUPLED RECEPTOR 158-RELATED |
Ama17458 | PUTATIVE-RELATED |
Ama17459 | |
Ama17460 | CXC DOMAIN-CONTAINING PROTEIN-RELATED |
Ama17461 | CXC DOMAIN-CONTAINING PROTEIN-RELATED |
Ama17462 | |
Ama17463 | PARANEOPLASTIC ANTIGEN |
Ama17464 | REVERSE TRANSCRIPTASES |
Ama17465 | |
Ama17466 | ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN |
Ama17471 | TYROSINASE FAMILY MEMBER |
Ama17472 | 52 KDA REPRESSOR OF THE INHIBITOR OF THE PROTEIN KINASE-LIKE PROTEIN-RELATED |
Ama17473 |