The Deep-Sea Chemosymbiotic Clam Archivesica marissinica is a species of deep-sea clam in the family Vesicomyidae, commonly found at the Haima cold seep on the northwest continental slope of the South China Sea. This species is well-adapted to extreme environments and relies on symbiotic sulfur-oxidizing bacteria housed in its gills for nutrition. Archivesica marissinica plays a significant role in cold seep ecosystems by contributing to nutrient cycling and supporting diverse microbial and faunal communities.
Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
---|---|---|---|---|---|---|
Archivesica marissinica | Mollusca | Deep-Sea Clam | Hydrothermal vent | 1,361 | Haima cold seep in the South China Sea | 2291877 |
Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
---|---|---|---|---|---|---|---|---|
ASM1484369v1 | 1.5Gb | Chromosome | 2020 | JABXNX01 | Hong Kong Baptist University | PRJNA629898 | 93.50% | 28,949 |
Title | Journal | Pubmed ID |
---|---|---|
Host-Endosymbiont Genome Integration in a Deep-Sea Chemosymbiotic Clam | Molecular Biology and Evolution | 32956455 |
Gene ID | Description |
---|---|
Ama17056 | SAL-LIKE PROTEIN |
Ama17059 | TRICHOPLEIN KERATIN FILAMENT-BINDING PROTEIN FAMILY MEMBER |
Ama17063 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
Ama17065 | MIR DOMAIN-CONTAINING PROTEIN |
Ama17068 | CENTROSOMAL PROTEIN 2 |
Ama17069 | |
Ama17070 | |
Ama17071 | ENDOSOME-ASSOCIATED TRAFFICKING REGULATOR 1 |
Ama17074 | |
Ama17075 | THAP DOMAIN PROTEIN |
Ama17076 | EXONUCLEASE, PHAGE-TYPE/RECB, C-TERMINAL DOMAIN-CONTAINING PROTEIN |
Ama17077 | |
Ama17078 | UNCHARACTERIZED |
Ama17080 | NCL1 YEAST -RELATED NOL1/NOP2/FMU SUN DOMAIN-CONTAINING |
Ama17082 | IMIDAZOLONEPROPIONASE |
Ama17085 | |
Ama17086 | |
Ama17087 | - |
Ama17088 | ATP-DEPENDENT RNA HELICASE |
Ama17089 | ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN |
Ama17091 | CYSTEINE AND HISTIDINE-RICH PROTEIN 1 |
Ama17093 | |
Ama17094 | FORKHEAD BOX PROTEIN |
Ama17095 | |
Ama17096 | ADHESION G-PROTEIN COUPLED RECEPTOR |
Ama17097 | DDB1- AND CUL4-ASSOCIATED FACTOR 11 |
Ama17099 | UNCHARACTERIZED |
Ama17103 | UNCHARACTERIZED |
Ama17104 | UNCHARACTERIZED |
Ama17105 | UNCHARACTERIZED |
Ama17106 | COLLAGEN ALPHA |
Ama17107 | COLLAGEN ALPHA |
Ama17108 | |
Ama17109 | |
Ama17110 | |
Ama17111 | |
Ama17113 | COLLAGEN ALPHA |
Ama17114 | COLLAGEN ALPHA |
Ama17115 | |
Ama17116 | |
Ama17117 | |
Ama17118 | |
Ama17119 | |
Ama17121 | CONNECTIVE TISSUE GROWTH FACTOR-RELATED |
Ama17122 | |
Ama17123 | |
Ama17124 | MYOSUPPRESSIN RECEPTOR 1, ISOFORM B-RELATED |
Ama17125 | MYOSUPPRESSIN RECEPTOR 1, ISOFORM B-RELATED |
Ama17126 | REGULATOR OF MICROTUBULE DYNAMICS PROTEIN |
Ama17127 | DUAL SERINE/THREONINE AND TYROSINE PROTEIN KINASE |