The Deep-Sea Chemosymbiotic Clam Archivesica marissinica is a species of deep-sea clam in the family Vesicomyidae, commonly found at the Haima cold seep on the northwest continental slope of the South China Sea. This species is well-adapted to extreme environments and relies on symbiotic sulfur-oxidizing bacteria housed in its gills for nutrition. Archivesica marissinica plays a significant role in cold seep ecosystems by contributing to nutrient cycling and supporting diverse microbial and faunal communities.
Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
---|---|---|---|---|---|---|
Archivesica marissinica | Mollusca | Deep-Sea Clam | Hydrothermal vent | 1,361 | Haima cold seep in the South China Sea | 2291877 |
Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
---|---|---|---|---|---|---|---|---|
ASM1484369v1 | 1.5Gb | Chromosome | 2020 | JABXNX01 | Hong Kong Baptist University | PRJNA629898 | 93.50% | 28,949 |
Title | Journal | Pubmed ID |
---|---|---|
Host-Endosymbiont Genome Integration in a Deep-Sea Chemosymbiotic Clam | Molecular Biology and Evolution | 32956455 |
Gene ID | Description |
---|---|
Ama17282 | |
Ama17284 | CXC DOMAIN-CONTAINING PROTEIN-RELATED |
Ama17285 | |
Ama17286 | |
Ama17288 | |
Ama17289 | TRANSPOSON |
Ama17290 | TRANSPOSON |
Ama17291 | C2H2-TYPE DOMAIN-CONTAINING PROTEIN |
Ama17292 | PROTEASOME SUBUNIT ALPHA/BETA |
Ama17293 | PEPTIDASE |
Ama17294 | INTEGRASE CORE DOMAIN CONTAINING PROTEIN |
Ama17295 | |
Ama17296 | FTP DOMAIN-CONTAINING PROTEIN |
Ama17297 | |
Ama17298 | |
Ama17299 | |
Ama172_5db7b01a | |
Ama17300 | FTP DOMAIN-CONTAINING PROTEIN |
Ama17301 | |
Ama17302 | MULTIPLE EPIDERMAL GROWTH FACTOR-LIKE DOMAINS PROTEIN |
Ama17303 | |
Ama17304 | |
Ama17305 | ZINC FINGER PROTEIN |
Ama17306 | |
Ama17307 | CXC DOMAIN-CONTAINING PROTEIN-RELATED |
Ama17309 | EXONUCLEASE, PHAGE-TYPE/RECB, C-TERMINAL DOMAIN-CONTAINING PROTEIN |
Ama17310 | THAP DOMAIN PROTEIN |
Ama17311 | DUF853 DOMAIN-CONTAINING PROTEIN |
Ama17356 | |
Ama17358 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN-RELATED |
Ama17359 | CXC DOMAIN-CONTAINING PROTEIN-RELATED |
Ama17360 | |
Ama17361 | |
Ama17362 | RAD, GEM/KIR FAMILY MEMBER 2, ISOFORM C |
Ama17385 | |
Ama17386 | |
Ama17387 | |
Ama17388 | STEROL O-ACYLTRANSFERASE |
Ama17389 | |
Ama17390 | |
Ama17391 | TBC1 DOMAIN FAMILY MEMBER 20/GTPASE |
Ama17393 | - |
Ama17394 | |
Ama17395 | |
Ama17399 | TITIN |
Ama173_5db7b01a | PROTEIN CBG26694 |
Ama17400 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
Ama17401 | T-CELL ACTIVATION RHO GTPASE ACTIVATING PROTEIN-RELATED |
Ama17403 | |
Ama17411 | PUTATIVE-RELATED |