The Deep-Sea Chemosymbiotic Clam Archivesica marissinica is a species of deep-sea clam in the family Vesicomyidae, commonly found at the Haima cold seep on the northwest continental slope of the South China Sea. This species is well-adapted to extreme environments and relies on symbiotic sulfur-oxidizing bacteria housed in its gills for nutrition. Archivesica marissinica plays a significant role in cold seep ecosystems by contributing to nutrient cycling and supporting diverse microbial and faunal communities.
Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
---|---|---|---|---|---|---|
Archivesica marissinica | Mollusca | Deep-Sea Clam | Hydrothermal vent | 1,361 | Haima cold seep in the South China Sea | 2291877 |
Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
---|---|---|---|---|---|---|---|---|
ASM1484369v1 | 1.5Gb | Chromosome | 2020 | JABXNX01 | Hong Kong Baptist University | PRJNA629898 | 93.50% | 28,949 |
Title | Journal | Pubmed ID |
---|---|---|
Host-Endosymbiont Genome Integration in a Deep-Sea Chemosymbiotic Clam | Molecular Biology and Evolution | 32956455 |
Gene ID | Description |
---|---|
Ama17535 | NF-KAPPA-B INHIBITOR ALPHA |
Ama17536 | SACSIN |
Ama17537 | SACSIN |
Ama17538 | SACSIN |
Ama17539 | N4BP1-RELATED |
Ama17542 | |
Ama17543 | 52 KDA REPRESSOR OF THE INHIBITOR OF THE PROTEIN KINASE-LIKE PROTEIN-RELATED |
Ama17544 | |
Ama17545 | ZINC FINGER PROTEIN |
Ama17548 | |
Ama17549 | |
Ama17550 | |
Ama17551 | ALKYL/ARYL-SULFATASE |
Ama17552 | |
Ama17553 | RE40534P-RELATED |
Ama17555 | FORMAMIDOPYRIMIDINE-DNA GLYCOSYLASE |
Ama17556 | STEROID 17-ALPHA-HYDROXYLASE/17,20 LYASE |
Ama17557 | FORMAMIDOPYRIMIDINE-DNA GLYCOSYLASE |
Ama17558 | STEROID 17-ALPHA-HYDROXYLASE/17,20 LYASE |
Ama17559 | |
Ama17560 | BIOTINIDASE-RELATED |
Ama17561 | WD REPEAT-CONTAINING PROTEIN 97 |
Ama17563 | UNCHARACTERIZED |
Ama17564 | WD REPEAT-CONTAINING PROTEIN 97 |
Ama17565 | |
Ama17567 | |
Ama17568 | |
Ama17569 | TRANS-SULFURATION ENZYME FAMILY MEMBER |
Ama17570 | |
Ama17572 | ARYLACETAMIDE DEACETYLASE |
Ama17573 | EUKARYOTIC TRANSLATION INITIATION FACTOR 2-ALPHA KINASE EIF2-ALPHA KINASE -RELATED |
Ama17574 | PROTEASE FAMILY M14 CARBOXYPEPTIDASE A,B |
Ama17575 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
Ama17576 | RNA-BINDING (RRM/RBD/RNP MOTIFS) FAMILY PROTEIN |
Ama17577 | |
Ama17578 | |
Ama17579 | CENTROSOMAL PROTEIN OF 76 KDA |
Ama17580 | PUTATIVE-RELATED |
Ama17581 | |
Ama17582 | PIGGYBAC TRANSPOSABLE ELEMENT-DERIVED PROTEIN 4 |
Ama17583 | |
Ama17584 | CXC DOMAIN-CONTAINING PROTEIN-RELATED |
Ama17585 | |
Ama17586 | AMINO ACID TRANSPORTER |
Ama17589 | |
Ama17590 | CYCLINS |
Ama17591 | LONG-CHAIN-FATTY-ACID--COA LIGASE |
Ama17592 | LATROPHILIN RECEPTOR-LIKE PROTEIN A |
Ama17593 | GTP-BINDING PROTEIN ALPHA SUBUNIT |
Ama17597 | GTP-BINDING PROTEIN ALPHA SUBUNIT |