The Deep-Sea Chemosymbiotic Clam Archivesica marissinica is a species of deep-sea clam in the family Vesicomyidae, commonly found at the Haima cold seep on the northwest continental slope of the South China Sea. This species is well-adapted to extreme environments and relies on symbiotic sulfur-oxidizing bacteria housed in its gills for nutrition. Archivesica marissinica plays a significant role in cold seep ecosystems by contributing to nutrient cycling and supporting diverse microbial and faunal communities.
Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
---|---|---|---|---|---|---|
Archivesica marissinica | Mollusca | Deep-Sea Clam | Hydrothermal vent | 1,361 | Haima cold seep in the South China Sea | 2291877 |
Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
---|---|---|---|---|---|---|---|---|
ASM1484369v1 | 1.5Gb | Chromosome | 2020 | JABXNX01 | Hong Kong Baptist University | PRJNA629898 | 93.50% | 28,949 |
Title | Journal | Pubmed ID |
---|---|---|
Host-Endosymbiont Genome Integration in a Deep-Sea Chemosymbiotic Clam | Molecular Biology and Evolution | 32956455 |
Gene ID | Description |
---|---|
Ama17128 | DUAL SERINE/THREONINE AND TYROSINE PROTEIN KINASE |
Ama17129 | RAS-RELATED PROTEIN RAB |
Ama17130 | |
Ama17131 | ANKYRIN REPEAT DOMAIN-CONTAINING PROTEIN 12 |
Ama17135 | ANKYRIN REPEAT DOMAIN-CONTAINING PROTEIN 12 |
Ama17136 | CALCIUM/CALMODULIN-DEPENDENT PROTEIN KINASE KINASE-RELATED |
Ama17137 | |
Ama17138 | HL07962P-RELATED |
Ama17139 | BONUS, ISOFORM C-RELATED |
Ama17140 | ROTATIN |
Ama17141 | 60S RIBOSOMAL PROTEIN L13 |
Ama17142 | ANKYRIN REPEAT-CONTAINING |
Ama17148 | ANKYRIN REPEAT DOMAIN-CONTAINING PROTEIN 60 |
Ama17150 | IROQUOIS-CLASS HOMEODOMAIN PROTEIN IRX |
Ama17151 | IROQUOIS-CLASS HOMEODOMAIN PROTEIN IRX |
Ama17152 | ANILLIN/RHOTEKIN RTKN |
Ama17154 | VITELLOGENIN RECEPTOR-LIKE PROTEIN-RELATED-RELATED |
Ama17157 | FI04643P-RELATED |
Ama17159 | |
Ama17162 | |
Ama17165 | PROTEIN CBG10425 |
Ama17167 | |
Ama17176 | CADHERIN-23 |
Ama17177 | CADHERIN-23 |
Ama17178 | CADHERIN-23 |
Ama17179 | PIKACHURIN-LIKE PROTEIN |
Ama17180 | |
Ama17181 | SOLUTE CARRIER FAMILY 22 MEMBER |
Ama17183 | INHIBITOR OF APOPTOSIS |
Ama17184 | RNA POLYMERASE II TRANSCRIPTIONAL COACTIVATOR |
Ama17185 | HAT FAMILY DIMERISATION DOMAINCONTAINING PROTEIN-RELATED |
Ama17186 | |
Ama17187 | CXC DOMAIN-CONTAINING PROTEIN-RELATED |
Ama17188 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
Ama17189 | |
Ama17191 | |
Ama17192 | |
Ama17193 | EUKARYOTIC TRANSLATION INITIATION FACTOR 2-ALPHA KINASE EIF2-ALPHA KINASE -RELATED |
Ama17195 | ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN |
Ama17196 | |
Ama17197 | |
Ama17198 | INTEGRASE CORE DOMAIN CONTAINING PROTEIN |
Ama17199 | INHIBITOR OF APOPTOSIS |
Ama17200 | RNA POLYMERASE II TRANSCRIPTIONAL COACTIVATOR |
Ama17201 | UNCHARACTERIZED |
Ama17202 | LYSYL-TRNA SYNTHETASE |
Ama17203 | |
Ama17204 | PIGGYBAC TRANSPOSABLE ELEMENT-DERIVED PROTEIN 4 |
Ama17205 | |
Ama17206 |