The Deep-Sea Chemosymbiotic Clam Archivesica marissinica is a species of deep-sea clam in the family Vesicomyidae, commonly found at the Haima cold seep on the northwest continental slope of the South China Sea. This species is well-adapted to extreme environments and relies on symbiotic sulfur-oxidizing bacteria housed in its gills for nutrition. Archivesica marissinica plays a significant role in cold seep ecosystems by contributing to nutrient cycling and supporting diverse microbial and faunal communities.
Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
---|---|---|---|---|---|---|
Archivesica marissinica | Mollusca | Deep-Sea Clam | Hydrothermal vent | 1,361 | Haima cold seep in the South China Sea | 2291877 |
Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
---|---|---|---|---|---|---|---|---|
ASM1484369v1 | 1.5Gb | Chromosome | 2020 | JABXNX01 | Hong Kong Baptist University | PRJNA629898 | 93.50% | 28,949 |
Title | Journal | Pubmed ID |
---|---|---|
Host-Endosymbiont Genome Integration in a Deep-Sea Chemosymbiotic Clam | Molecular Biology and Evolution | 32956455 |
Gene ID | Description |
---|---|
Ama16922 | ZGC:195170 |
Ama16923 | CHITINASE |
Ama16924 | |
Ama16925 | |
Ama16927 | 5'-NUCLEOTIDASE-RELATED |
Ama16929 | UNCHARACTERIZED |
Ama16930 | INHIBITOR OF APOPTOSIS |
Ama16931 | |
Ama16932 | |
Ama16934 | DREV PROTEIN |
Ama16935 | SODIUM/CHLORIDE DEPENDENT TRANSPORTER |
Ama16936 | SODIUM/CHLORIDE DEPENDENT TRANSPORTER |
Ama16937 | |
Ama16938 | MARVEL-CONTAINING POTENTIAL LIPID RAFT-ASSOCIATED PROTEIN |
Ama16939 | ZINC FINGER PROTEIN |
Ama16940 | PERIAXIN-LIKE |
Ama16942 | |
Ama16943 | RING FINGER AND SRY DOMAIN-CONTAINING |
Ama16944 | LOC361192 |
Ama16945 | ZINC FINGER PROTEIN |
Ama16946 | KDEL LYS-ASP-GLU-LEU CONTAINING - RELATED |
Ama16948 | BTG3-ASSOCIATED NUCLEAR PROTEIN BANP |
Ama16949 | DNA HELICASE RECQ FAMILY MEMBER |
Ama16950 | |
Ama16951 | EXONUCLEASE, PHAGE-TYPE/RECB, C-TERMINAL DOMAIN-CONTAINING PROTEIN |
Ama16953 | |
Ama16960 | PIGGYBAC TRANSPOSABLE ELEMENT-DERIVED PROTEIN 4 |
Ama16961 | |
Ama16962 | FMRFAMIDE RECEPTOR-RELATED |
Ama16964 | |
Ama16965 | DNA REPLICATION LICENSING FACTOR MCM FAMILY MEMBER |
Ama16966 | E3 UBIQUITIN-PROTEIN LIGASE RNF180 |
Ama16967 | |
Ama16968 | PROTEASE S28 PRO-X CARBOXYPEPTIDASE-RELATED |
Ama16970 | PROTEIN C20ORF24 RAB5-INTERACTING PROTEIN |
Ama16971 | SARCOSINE DEHYDROGENASE-RELATED |
Ama16972 | AMINOMETHYLTRANSFERASE |
Ama16973 | COPINE |
Ama16974 | PRE-MRNA CLEAVAGE FACTOR IM, 25KD SUBUNIT |
Ama16976 | KRUEPPEL-LIKE TRANSCRIPTION FACTOR |
Ama16977 | RAS-ASSOCIATING DOMAIN-CONTAINING PROTEIN |
Ama16978 | |
Ama16979 | REGULATOR OF G-PROTEIN SIGNALING PROTEIN-LIKE |
Ama16980 | METHYLTHIOADENOSINE/PURINE NUCLEOSIDE PHOSPHORYLASE |
Ama16981 | UNCHARACTERIZED |
Ama16982 | |
Ama16983 | |
Ama16984 | ARGININE DEMETHYLASE AND LYSYL-HYDROXYLASE JMJD |
Ama16985 | |
Ama16986 |