The Deep-Sea Chemosymbiotic Clam Archivesica marissinica is a species of deep-sea clam in the family Vesicomyidae, commonly found at the Haima cold seep on the northwest continental slope of the South China Sea. This species is well-adapted to extreme environments and relies on symbiotic sulfur-oxidizing bacteria housed in its gills for nutrition. Archivesica marissinica plays a significant role in cold seep ecosystems by contributing to nutrient cycling and supporting diverse microbial and faunal communities.
Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
---|---|---|---|---|---|---|
Archivesica marissinica | Mollusca | Deep-Sea Clam | Hydrothermal vent | 1,361 | Haima cold seep in the South China Sea | 2291877 |
Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
---|---|---|---|---|---|---|---|---|
ASM1484369v1 | 1.5Gb | Chromosome | 2020 | JABXNX01 | Hong Kong Baptist University | PRJNA629898 | 93.50% | 28,949 |
Title | Journal | Pubmed ID |
---|---|---|
Host-Endosymbiont Genome Integration in a Deep-Sea Chemosymbiotic Clam | Molecular Biology and Evolution | 32956455 |
Gene ID | Description |
---|---|
Ama17207 | RAS-ASSOCIATING DOMAIN-CONTAINING PROTEIN |
Ama17209 | |
Ama17210 | |
Ama17211 | CAS SCAFFOLDING PROTEIN |
Ama17213 | |
Ama17214 | WU:FJ29H11 |
Ama17215 | WU:FJ29H11 |
Ama17217 | SMALL CONDUCTANCE CALCIUM-ACTIVATED POTASSIUM CHANNEL |
Ama17218 | CXC DOMAIN-CONTAINING PROTEIN-RELATED |
Ama17220 | FMRFAMIDE RECEPTOR-RELATED |
Ama17222 | NANOS PROTEIN |
Ama17224 | |
Ama17225 | |
Ama17226 | PUTATIVE-RELATED |
Ama17227 | PHAGE_INTEGRASE DOMAIN-CONTAINING PROTEIN |
Ama17231 | PHOSPHOENOLPYRUVATE CARBOXYKINASE |
Ama17232 | PHOSPHOENOLPYRUVATE CARBOXYKINASE |
Ama17233 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
Ama17234 | |
Ama17235 | INTEGRASE CORE DOMAIN CONTAINING PROTEIN |
Ama17236 | |
Ama17237 | PHOSPHOENOLPYRUVATE CARBOXYKINASE |
Ama17239 | NISCHARIN RELATED |
Ama17240 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
Ama17241 | PHAGE_INTEGRASE DOMAIN-CONTAINING PROTEIN |
Ama17242 | ULP_PROTEASE DOMAIN-CONTAINING PROTEIN |
Ama17243 | |
Ama17244 | |
Ama17245 | CXC DOMAIN-CONTAINING PROTEIN-RELATED |
Ama17246 | PHOSPHOHEXOMUTASE FAMILY MEMBER |
Ama17247 | |
Ama17248 | PHOSPHOHEXOMUTASE FAMILY MEMBER |
Ama17249 | CXC DOMAIN-CONTAINING PROTEIN-RELATED |
Ama17250 | PHOSPHOHEXOMUTASE FAMILY MEMBER |
Ama17253 | UNCHARACTERIZED |
Ama17254 | |
Ama17255 | |
Ama17258 | BIFUNCTIONAL POLYMYXIN RESISTANCE PROTEIN ARNA |
Ama17259 | |
Ama17260 | |
Ama17261 | HAT FAMILY DIMERISATION DOMAINCONTAINING PROTEIN-RELATED |
Ama17262 | NFAT |
Ama17265 | NUDIX HYDROLASE |
Ama17267 | DNA LIGASE |
Ama17268 | |
Ama17269 | |
Ama17270 | PUTATIVE-RELATED |
Ama17274 | PLEXUS, ISOFORM A |
Ama17275 | TRANSCRIPTIONAL REPRESSOR CTCFL-RELATED |
Ama17276 | ADAMTS A DISINTEGRIN AND METALLOPROTEASE WITH THROMBOSPONDIN MOTIFS PROTEASE |