The Deep-Sea Chemosymbiotic Clam Archivesica marissinica is a species of deep-sea clam in the family Vesicomyidae, commonly found at the Haima cold seep on the northwest continental slope of the South China Sea. This species is well-adapted to extreme environments and relies on symbiotic sulfur-oxidizing bacteria housed in its gills for nutrition. Archivesica marissinica plays a significant role in cold seep ecosystems by contributing to nutrient cycling and supporting diverse microbial and faunal communities.
Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
---|---|---|---|---|---|---|
Archivesica marissinica | Mollusca | Deep-Sea Clam | Hydrothermal vent | 1,361 | Haima cold seep in the South China Sea | 2291877 |
Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
---|---|---|---|---|---|---|---|---|
ASM1484369v1 | 1.5Gb | Chromosome | 2020 | JABXNX01 | Hong Kong Baptist University | PRJNA629898 | 93.50% | 28,949 |
Title | Journal | Pubmed ID |
---|---|---|
Host-Endosymbiont Genome Integration in a Deep-Sea Chemosymbiotic Clam | Molecular Biology and Evolution | 32956455 |
Gene ID | Description |
---|---|
Ama17803 | ANOCTAMIN |
Ama17804 | ANTIGEN BSP, PUTATIVE-RELATED |
Ama17807 | AMINO ACID TRANSPORTER |
Ama17808 | |
Ama17809 | AMINO ACID TRANSPORTER |
Ama17812 | |
Ama17813 | ETS |
Ama17814 | - |
Ama17815 | PUTATIVE-RELATED |
Ama17817 | LOW-DENSITY LIPOPROTEIN RECEPTOR CLASS A DOMAIN-CONTAINING PROTEIN 2 |
Ama17818 | |
Ama17820 | ETS |
Ama17824 | ENDONUCLEASE/EXONUCLEASE/PHOSPHATASE FAMILY DOMAIN-CONTAINING PROTEIN 1 |
Ama17825 | IMIDAZOLONEPROPIONASE |
Ama17826 | IMIDAZOLONEPROPIONASE |
Ama17827 | IMIDAZOLONEPROPIONASE |
Ama17828 | DYNEIN HEAVY CHAIN 1, AXONEMAL-LIKE PROTEIN |
Ama17829 | DYNEIN HEAVY CHAIN 1, AXONEMAL-LIKE PROTEIN |
Ama17830 | MALE FERTILITY FACTOR KL5 |
Ama17832 | MALE FERTILITY FACTOR KL5 |
Ama17835 | RHOPHILIN |
Ama17836 | GMP REDUCTASE |
Ama17846 | THAP DOMAIN PROTEIN |
Ama17847 | SMALL NUCLEAR RIBONUCLEOPROTEIN-ASSOCIATED PROTEIN B AND N |
Ama17848 | |
Ama17849 | |
Ama17850 | CHROMODOMAIN-HELICASE-DNA-BINDING PROTEIN 3-RELATED-RELATED |
Ama17851 | CHROMODOMAIN-HELICASE-DNA-BINDING PROTEIN 9 |
Ama17852 | MITOCHONDRIAL RNA PSEUDOURIDINE SYNTHASE |
Ama17853 | |
Ama17854 | ATP-DEPENDENT DNA HELICASE |
Ama17855 | |
Ama17856 | |
Ama17857 | REVERSE TRANSCRIPTASES |
Ama17858 | |
Ama17859 | |
Ama17860 | PHOSPHOACETYLGLUCOSAMINE MUTASE |
Ama17861 | |
Ama17862 | ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN |
Ama17863 | |
Ama17864 | REVERSE TRANSCRIPTASES |
Ama17865 | |
Ama17866 | |
Ama17867 | DEATH DOMAIN-CONTAINING PROTEIN |
Ama17868 | PUTATIVE-RELATED |
Ama17869 | THREE PRIME REPAIR EXONUCLEASE 1, 2 |
Ama17870 | SPHINGOMYELIN PHOSPHODIESTERASE |
Ama17871 | SPHINGOMYELIN PHOSPHODIESTERASE |
Ama17872 | UBIQUITIN-ACTIVATING ENZYME E1 |
Ama17873 | - |