The Deep-Sea Chemosymbiotic Clam Archivesica marissinica is a species of deep-sea clam in the family Vesicomyidae, commonly found at the Haima cold seep on the northwest continental slope of the South China Sea. This species is well-adapted to extreme environments and relies on symbiotic sulfur-oxidizing bacteria housed in its gills for nutrition. Archivesica marissinica plays a significant role in cold seep ecosystems by contributing to nutrient cycling and supporting diverse microbial and faunal communities.
Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
---|---|---|---|---|---|---|
Archivesica marissinica | Mollusca | Deep-Sea Clam | Hydrothermal vent | 1,361 | Haima cold seep in the South China Sea | 2291877 |
Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
---|---|---|---|---|---|---|---|---|
ASM1484369v1 | 1.5Gb | Chromosome | 2020 | JABXNX01 | Hong Kong Baptist University | PRJNA629898 | 93.50% | 28,949 |
Title | Journal | Pubmed ID |
---|---|---|
Host-Endosymbiont Genome Integration in a Deep-Sea Chemosymbiotic Clam | Molecular Biology and Evolution | 32956455 |
Gene ID | Description |
---|---|
Ama19237 | COATOMER SUBUNIT GAMMA |
Ama19238 | PROTEIN ATP6V1FNB-LIKE |
Ama19239 | |
Ama19240 | KICSTOR COMPLEX PROTEIN C12ORF66 |
Ama19241 | DUAL SPECIFICITY PROTEIN KINASE |
Ama19242 | TRANSLATION INITIATION FACTOR 5A FAMILY MEMBER |
Ama19243 | |
Ama19244 | VOLTAGE-GATED POTASSIUM CHANNEL |
Ama19245 | SULFATASE MODIFYING FACTOR 1, 2 |
Ama19246 | G-PROTEIN COUPLED RECEPTOR |
Ama19247 | PROPERDIN |
Ama19249 | RECQ-MEDIATED GENOME INSTABILITY PROTEIN 1 RMI1 |
Ama19250 | |
Ama19252 | PHAGE_INTEGRASE DOMAIN-CONTAINING PROTEIN |
Ama19254 | |
Ama19255 | VOLTAGE-GATED POTASSIUM CHANNEL |
Ama19260 | |
Ama19262 | DYNEIN HEAVY CHAIN |
Ama19264 | FIBRONECTIN TYPE-III DOMAIN-CONTAINING PROTEIN-RELATED |
Ama19265 | SPLICING FACTOR 45 SPF45 |
Ama19266 | 52 KDA REPRESSOR OF THE INHIBITOR OF THE PROTEIN KINASE-LIKE PROTEIN-RELATED |
Ama19267 | DYNEIN HEAVY CHAIN |
Ama19272 | |
Ama19273 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
Ama19274 | TRANSPOSABLE ELEMENT-RELATED |
Ama19275 | DYNEIN HEAVY CHAIN |
Ama19276 | MARINER MOS1 TRANSPOSASE-LIKE PROTEIN |
Ama19277 | RIBONUCLEASE P PROTEIN SUBUNIT P14 |
Ama19280 | JITTERBUG, ISOFORM N |
Ama19281 | JITTERBUG, ISOFORM N |
Ama19282 | JITTERBUG, ISOFORM N |
Ama19283 | JITTERBUG, ISOFORM N |
Ama19284 | JITTERBUG, ISOFORM N |
Ama19286 | JITTERBUG, ISOFORM N |
Ama19287 | |
Ama19288 | GRIP-1 ASSOCIATED PROTEIN 1 |
Ama19290 | NUCLEAR PROTEIN MDM1 |
Ama19291 | ROUND SPERMATID BASIC PROTEIN 1 |
Ama19294 | PAIRED BOX PROTEIN PAX-6-RELATED-RELATED |
Ama19296 | TROPOMYOSIN |
Ama19297 | ZINC FINGER CCHC DOMAIN CONTAINING PROTEIN |
Ama19298 | COLD SHOCK DOMAIN PROTEIN 2 |
Ama19299 | TRANSFERASE, PUTATIVE-RELATED |
Ama192_5db7b01a | DED DOMAIN-CONTAINING PROTEIN |
Ama19300 | LD33804P |
Ama19301 | LD33804P |
Ama19307 | |
Ama19308 | RBR FAMILY RING FINGER AND IBR DOMAIN-CONTAINING |
Ama19309 | SHIPPO-1-RELATED |
Ama19310 | HISTONE DEACETYLASE HDAC1-RELATED |