The Deep-Sea Chemosymbiotic Clam Archivesica marissinica is a species of deep-sea clam in the family Vesicomyidae, commonly found at the Haima cold seep on the northwest continental slope of the South China Sea. This species is well-adapted to extreme environments and relies on symbiotic sulfur-oxidizing bacteria housed in its gills for nutrition. Archivesica marissinica plays a significant role in cold seep ecosystems by contributing to nutrient cycling and supporting diverse microbial and faunal communities.
Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
---|---|---|---|---|---|---|
Archivesica marissinica | Mollusca | Deep-Sea Clam | Hydrothermal vent | 1,361 | Haima cold seep in the South China Sea | 2291877 |
Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
---|---|---|---|---|---|---|---|---|
ASM1484369v1 | 1.5Gb | Chromosome | 2020 | JABXNX01 | Hong Kong Baptist University | PRJNA629898 | 93.50% | 28,949 |
Title | Journal | Pubmed ID |
---|---|---|
Host-Endosymbiont Genome Integration in a Deep-Sea Chemosymbiotic Clam | Molecular Biology and Evolution | 32956455 |
Gene ID | Description |
---|---|
Ama19440 | UNCHARACTERIZED |
Ama19441 | PHOSPHOSERINE PHOSPHATASE |
Ama19442 | 50S RIBOSOMAL PROTEIN L9 |
Ama19443 | |
Ama19445 | SYNAPSIN |
Ama19450 | TWINFILIN |
Ama19451 | ATP-DEPENDENT RNA HELICASE DBP3 |
Ama19452 | NITROGEN PERMEASE REGULATOR 2/TUMOR SUPPRESSOR CANDIDATE 4 |
Ama19453 | RING/FYVE/PHD ZINC FINGER DOMAIN-CONTAINING |
Ama19454 | SERINE PROTEASE |
Ama19455 | NUCLEAR PROTEIN E3-3 |
Ama19456 | HEMK METHYLTRANSFERASE |
Ama19457 | |
Ama19458 | |
Ama19459 | |
Ama19460 | |
Ama19462 | PARP/ZINC FINGER CCCH TYPE DOMAIN CONTAINING PROTEIN |
Ama19463 | TRANSMEMBRANE PROTEIN ADIPOCYTE-ASSOCIATED 1 |
Ama19464 | SODIUM/CHLORIDE DEPENDENT TRANSPORTER |
Ama19466 | SODIUM/CHLORIDE DEPENDENT TRANSPORTER |
Ama19467 | SODIUM/CHLORIDE DEPENDENT TRANSPORTER |
Ama19468 | |
Ama19469 | UNCHARACTERIZED |
Ama19470 | NY-REN-58 ANTIGEN |
Ama19471 | |
Ama19472 | |
Ama19473 | |
Ama19475 | |
Ama19476 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
Ama19478 | UNCHARACTERIZED |
Ama19479 | |
Ama19480 | TRANSPOSABLE ELEMENT-RELATED |
Ama19481 | PUTATIVE-RELATED |
Ama19482 | HISTONE DEACETYLASE HDAC1-RELATED |
Ama19484 | HISTONE DEACETYLASE-LIKE PROTEIN |
Ama19485 | PLEXIN |
Ama19486 | |
Ama19487 | TYROSINE SPECIFIC PROTEIN PHOSPHATASE AND DUAL SPECIFICITY PROTEIN PHOSPHATASE |
Ama19490 | G/T AND G/U MISMATCH-SPECIFIC DNA GLYCOSYLASE |
Ama19492 | |
Ama19494 | |
Ama19495 | CXC DOMAIN-CONTAINING PROTEIN-RELATED |
Ama19496 | INOSINE-5-MONOPHOSPHATE DEHYDROGENASE RELATED |
Ama19497 | CT120 PROTEIN |
Ama19498 | VACUOLAR ATP SYNTHASE SUBUNIT S1 |
Ama19500 | HISTONE-LYSINE N-METHYLTRANSFERASE SUV39H |
Ama19501 | UNCHARACTERIZED |
Ama19502 | PROTEIN CBG22215 |
Ama19503 | HISTONE-LYSINE N-METHYLTRANSFERASE SUV39H |
Ama19504 | UNCHARACTERIZED |