The Deep-Sea Chemosymbiotic Clam Archivesica marissinica is a species of deep-sea clam in the family Vesicomyidae, commonly found at the Haima cold seep on the northwest continental slope of the South China Sea. This species is well-adapted to extreme environments and relies on symbiotic sulfur-oxidizing bacteria housed in its gills for nutrition. Archivesica marissinica plays a significant role in cold seep ecosystems by contributing to nutrient cycling and supporting diverse microbial and faunal communities.
Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
---|---|---|---|---|---|---|
Archivesica marissinica | Mollusca | Deep-Sea Clam | Hydrothermal vent | 1,361 | Haima cold seep in the South China Sea | 2291877 |
Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
---|---|---|---|---|---|---|---|---|
ASM1484369v1 | 1.5Gb | Chromosome | 2020 | JABXNX01 | Hong Kong Baptist University | PRJNA629898 | 93.50% | 28,949 |
Title | Journal | Pubmed ID |
---|---|---|
Host-Endosymbiont Genome Integration in a Deep-Sea Chemosymbiotic Clam | Molecular Biology and Evolution | 32956455 |
Gene ID | Description |
---|---|
Ama19625 | |
Ama19633 | UNCHARACTERIZED |
Ama19636 | PHAGE_INTEGRASE DOMAIN-CONTAINING PROTEIN |
Ama19637 | |
Ama19638 | CILIA- AND FLAGELLA-ASSOCIATED PROTEIN 54 |
Ama19639 | ELONGATION FACTOR TU-RELATED |
Ama19640 | LEUCINE RICH REPEAT FAMILY PROTEIN |
Ama19642 | CILIA- AND FLAGELLA-ASSOCIATED PROTEIN 54 |
Ama19644 | CILIA- AND FLAGELLA-ASSOCIATED PROTEIN 54 |
Ama19647 | SLIT-ROBO RHO GTPASE ACTIVATING PROTEIN |
Ama19648 | TRANSMEMBRANE PROTEIN 243 |
Ama19649 | CYCLIN-D-BINDING MYB-LIKE TRANSCRIPTION FACTOR 1 |
Ama19650 | SUCCINYL-COA SYNTHETASE BETA CHAIN |
Ama19651 | SHORT STATURE HOMEOBOX |
Ama19652 | LD33804P |
Ama19653 | UNCHARACTERIZED |
Ama19655 | SHORT STATURE HOMEOBOX |
Ama19656 | |
Ama19658 | PLECKSTRIN |
Ama19660 | PROTEIN KINASE DOMAIN-CONTAINING PROTEIN-RELATED |
Ama19661 | PROTEIN KINASE DOMAIN-CONTAINING PROTEIN-RELATED |
Ama19663 | LD33804P |
Ama19665 | UBIQUITIN-CONJUGATING ENZYME E2 |
Ama19667 | |
Ama19668 | CALCIUM-DEPENDENT SECRETION ACTIVATOR |
Ama19672 | UPSET, ISOFORM A |
Ama19673 | DIVALENT CATION TRANSPORTER SOLUTE CARRIER FAMILY 41 |
Ama19674 | |
Ama19676 | |
Ama19677 | SIMILAR TO DNA SEGMENT, CHR 10, WAYNE STATE UNIVERSITY 102,-EXPRESSED |
Ama19679 | |
Ama19680 | SIMILAR TO DNA SEGMENT, CHR 10, WAYNE STATE UNIVERSITY 102,-EXPRESSED |
Ama19682 | |
Ama19683 | |
Ama19684 | |
Ama19687 | UNCHARACTERIZED |
Ama19689 | PROTEASE M1 ZINC METALLOPROTEASE |
Ama19690 | PROTEASE M1 ZINC METALLOPROTEASE |
Ama19691 | TOL-PAL SYSTEM PROTEIN TOLA |
Ama19692 | METABOTROPIC GLUTAMATE RECEPTOR |
Ama19694 | METABOTROPIC GLUTAMATE RECEPTOR |
Ama19695 | TRANSLOCON-ASSOCIATED PROTEIN, DELTA SUBUNIT |
Ama19696 | MAJOR FACILITATOR SUPERFAMILY TRANSPORTER 16, ISOFORM B |
Ama19697 | |
Ama19698 | |
Ama19699 | |
Ama19700 | |
Ama19701 | SI:DKEY-32E6.3 |
Ama19702 | TUBULIN |
Ama19703 | TUBULIN |