The Deep-Sea Chemosymbiotic Clam Archivesica marissinica is a species of deep-sea clam in the family Vesicomyidae, commonly found at the Haima cold seep on the northwest continental slope of the South China Sea. This species is well-adapted to extreme environments and relies on symbiotic sulfur-oxidizing bacteria housed in its gills for nutrition. Archivesica marissinica plays a significant role in cold seep ecosystems by contributing to nutrient cycling and supporting diverse microbial and faunal communities.
Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
---|---|---|---|---|---|---|
Archivesica marissinica | Mollusca | Deep-Sea Clam | Hydrothermal vent | 1,361 | Haima cold seep in the South China Sea | 2291877 |
Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
---|---|---|---|---|---|---|---|---|
ASM1484369v1 | 1.5Gb | Chromosome | 2020 | JABXNX01 | Hong Kong Baptist University | PRJNA629898 | 93.50% | 28,949 |
Title | Journal | Pubmed ID |
---|---|---|
Host-Endosymbiont Genome Integration in a Deep-Sea Chemosymbiotic Clam | Molecular Biology and Evolution | 32956455 |
Gene ID | Description |
---|---|
Ama19850 | ZINC FINGER PROTEIN |
Ama19851 | |
Ama19853 | EARLY GAMETOCYTE ENRICHED PHOSPHOPROTEIN EGXP |
Ama19854 | COPPER AMINE OXIDASE |
Ama19856 | |
Ama19857 | RING FINGER DOMAIN-CONTAINING, POLYCOMB GROUP COMPONENT |
Ama19858 | CALCIUM BINDING PROTEINS |
Ama19859 | CELL DIVISION PROTEIN KINASE |
Ama19861 | ZINC FINGER BED DOMAIN-CONTAINING PROTEIN 4 |
Ama19862 | |
Ama19863 | |
Ama19864 | |
Ama19868 | |
Ama19871 | |
Ama19872 | - |
Ama19873 | PHD/F-BOX CONTAINING PROTEIN |
Ama19874 | MITOCHONDRIAL 39S RIBOSOMAL PROTEIN L42 |
Ama19876 | |
Ama19877 | |
Ama19878 | GLUTATHIONE S-TRANSFERASE |
Ama19879 | CEREBELLIN-RELATED |
Ama19880 | |
Ama19881 | SULFATE TRANSPORTER |
Ama19882 | GLUTATHIONE S-TRANSFERASE-RELATED |
Ama19883 | PROTEIN CBG13728 |
Ama19884 | |
Ama19885 | |
Ama19891 | USP DOMAIN-CONTAINING PROTEIN |
Ama19892 | NITRILASE-RELATED |
Ama19893 | BIS(5'-ADENOSYL)-TRIPHOSPHATASE |
Ama19894 | CATION TRANSPORTING ATPASE |
Ama19895 | CATION TRANSPORTING ATPASE |
Ama19896 | |
Ama19897 | |
Ama19898 | PROTEIN CBG12054-RELATED |
Ama19899 | PROTEIN SIDEKICK |
Ama198_5db7b01a | MADS BOX PROTEIN |
Ama19901 | SERYL-TRNA SYNTHETASE |
Ama19902 | |
Ama19903 | |
Ama19905 | |
Ama19906 | AQUAPORIN TRANSPORTER |
Ama19907 | GAMMA TUBULIN COMPLEX PROTEIN |
Ama19909 | MONOACYLGLYCEROL LIPASE |
Ama19910 | HEAT SHOCK PROTEIN 90 FAMILY MEMBER |
Ama19912 | |
Ama19917 | MAKORIN-RELATED |
Ama19919 | MULTI-COPPER OXIDASE |
Ama19920 | KUNITZ-TYPE PROTEASE INHIBITOR-RELATED |
Ama19921 | KUNITZ-TYPE PROTEASE INHIBITOR-RELATED |