The Deep-Sea Chemosymbiotic Clam Archivesica marissinica is a species of deep-sea clam in the family Vesicomyidae, commonly found at the Haima cold seep on the northwest continental slope of the South China Sea. This species is well-adapted to extreme environments and relies on symbiotic sulfur-oxidizing bacteria housed in its gills for nutrition. Archivesica marissinica plays a significant role in cold seep ecosystems by contributing to nutrient cycling and supporting diverse microbial and faunal communities.
Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
---|---|---|---|---|---|---|
Archivesica marissinica | Mollusca | Deep-Sea Clam | Hydrothermal vent | 1,361 | Haima cold seep in the South China Sea | 2291877 |
Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
---|---|---|---|---|---|---|---|---|
ASM1484369v1 | 1.5Gb | Chromosome | 2020 | JABXNX01 | Hong Kong Baptist University | PRJNA629898 | 93.50% | 28,949 |
Title | Journal | Pubmed ID |
---|---|---|
Host-Endosymbiont Genome Integration in a Deep-Sea Chemosymbiotic Clam | Molecular Biology and Evolution | 32956455 |
Gene ID | Description |
---|---|
Ama19505 | TRNA PSEUDOURIDINE SYNTHASE D |
Ama19506 | PROTON MYO-INOSITOL COTRANSPORTER |
Ama19507 | PROTON MYO-INOSITOL COTRANSPORTER |
Ama19509 | TRANSCRIPTION INITIATION FACTOR IIIC TFIIIC , POLYPEPTIDE 6-RELATED |
Ama19510 | |
Ama19511 | VACUOLAR MEMBRANE PROTEIN YPL162C |
Ama19512 | S-ANTIGEN PROTEIN |
Ama19513 | |
Ama19514 | HECT DOMAIN UBIQUITIN-PROTEIN LIGASE |
Ama19518 | |
Ama19519 | RAS-ASSOCIATING DOMAIN-CONTAINING PROTEIN |
Ama19520 | TUMOR NECROSIS FACTOR RECEPTOR |
Ama19521 | PDZ DOMAIN CONTAINING WHIRLIN AND HARMONIN-RELATED |
Ama19522 | |
Ama19523 | UBIQUITIN CARBOXYL-TERMINAL HYDROLASE |
Ama19524 | |
Ama19525 | |
Ama19526 | ANKYRIN REPEAT PROTEIN |
Ama19527 | 60S RIBOSOMAL PROTEIN L18A |
Ama19528 | RYBP AND YAF2-RELATED |
Ama19531 | CYTOCHROME P450 FAMILY 7 |
Ama19537 | FMRFAMIDE-RELATED PEPTIDES |
Ama19538 | COILED-COIL DOMAIN-CONTAINING PROTEIN 51 |
Ama19539 | GLUTATHIONE REDUCTASE |
Ama19540 | IONOTROPIC GLUTAMATE RECEPTOR |
Ama19542 | MANNOSE, PHOSPHOLIPASE, LECTIN RECEPTOR RELATED |
Ama19543 | TESTIS-EXPRESSED PROTEIN 264 |
Ama19545 | AGAP004733-PA |
Ama19546 | |
Ama19547 | |
Ama19548 | |
Ama19549 | |
Ama19550 | RNA POLYMERASE II TRANSCRIPTIONAL COACTIVATOR |
Ama19551 | INHIBITOR OF APOPTOSIS |
Ama19552 | UBIQUITIN-LIKE DOMAIN-CONTAINING PROTEIN |
Ama19553 | PROTEIN SIDEKICK |
Ama19554 | PUTATIVE-RELATED |
Ama19555 | N-ACETYLGALACTOSAMINYLTRANSFERASE |
Ama19557 | UBIQUITIN THIOLESTERASE PROTEIN OTUB |
Ama19559 | PROTEIN SSUH2 HOMOLOG |
Ama19560 | HISTIDINE TRIAD HIT PROTEIN MEMBER |
Ama19561 | CARNITINE O-ACYLTRANSFERASE |
Ama19562 | MUSKELIN |
Ama19563 | UNCHARACTERIZED |
Ama19564 | |
Ama19565 | |
Ama19566 | PHOSPHOLIPASE A-2-ACTIVATING PROTEIN |
Ama19567 | UNCHARACTERIZED |
Ama19568 | USP DOMAIN-CONTAINING PROTEIN |
Ama19569 | USP DOMAIN-CONTAINING PROTEIN |