The Deep-Sea Chemosymbiotic Clam Archivesica marissinica is a species of deep-sea clam in the family Vesicomyidae, commonly found at the Haima cold seep on the northwest continental slope of the South China Sea. This species is well-adapted to extreme environments and relies on symbiotic sulfur-oxidizing bacteria housed in its gills for nutrition. Archivesica marissinica plays a significant role in cold seep ecosystems by contributing to nutrient cycling and supporting diverse microbial and faunal communities.
Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
---|---|---|---|---|---|---|
Archivesica marissinica | Mollusca | Deep-Sea Clam | Hydrothermal vent | 1,361 | Haima cold seep in the South China Sea | 2291877 |
Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
---|---|---|---|---|---|---|---|---|
ASM1484369v1 | 1.5Gb | Chromosome | 2020 | JABXNX01 | Hong Kong Baptist University | PRJNA629898 | 93.50% | 28,949 |
Title | Journal | Pubmed ID |
---|---|---|
Host-Endosymbiont Genome Integration in a Deep-Sea Chemosymbiotic Clam | Molecular Biology and Evolution | 32956455 |
Gene ID | Description |
---|---|
Ama19376 | SMALL INTEGRAL MEMBRANE PROTEIN 4 |
Ama19377 | UNCHARACTERIZED |
Ama19378 | DNA REPAIR PROTEIN XP-C / RAD4 |
Ama19379 | ENOLASE (DUF1399) |
Ama19380 | ENOLASE (DUF1399) |
Ama19381 | MONOCARBOXYLATE TRANSPORTER |
Ama19382 | |
Ama19383 | LIG_CHAN-GLU_BD DOMAIN-CONTAINING PROTEIN |
Ama19384 | LIG_CHAN-GLU_BD DOMAIN-CONTAINING PROTEIN |
Ama19385 | LIG_CHAN-GLU_BD DOMAIN-CONTAINING PROTEIN |
Ama19386 | 52 KDA REPRESSOR OF THE INHIBITOR OF THE PROTEIN KINASE-LIKE PROTEIN-RELATED |
Ama19387 | PUTATIVE-RELATED |
Ama19388 | WASH COMPLEX SUBUNIT 4 |
Ama19389 | WASH COMPLEX SUBUNIT 4 |
Ama19391 | DDB1- AND CUL4-ASSOCIATED FACTOR 12-RELATED |
Ama19393 | |
Ama19394 | |
Ama19395 | |
Ama19396 | THAP DOMAIN PROTEIN |
Ama19397 | TUMOR PROTEIN P63-REGULATED GENE 1-LIKE PROTEIN |
Ama19399 | UNCHARACTERIZED |
Ama19400 | CELL DIVISION CYCLE-ASSOCIATED PROTEIN 3 |
Ama19401 | |
Ama19402 | WD-40 REPEAT PROTEIN |
Ama19404 | TRANSPOSABLE ELEMENT-RELATED |
Ama19405 | ADIPOR/PROGESTIN RECEPTOR-RELATED |
Ama19406 | TRNA (GUANINE-9-) METHYLTRANSFERASE |
Ama19407 | MONOACYLGLYCEROL LIPASE |
Ama19408 | TRNA (GUANINE-9-) METHYLTRANSFERASE |
Ama19409 | MONOACYLGLYCEROL LIPASE |
Ama19410 | 5-HYDROXYTRYPTAMINE RECEPTOR |
Ama19414 | EXONUCLEASE, PHAGE-TYPE/RECB, C-TERMINAL DOMAIN-CONTAINING PROTEIN |
Ama19415 | FAS-ASSOCIATED PROTEIN |
Ama19416 | THAP DOMAIN-CONTAINING |
Ama19417 | |
Ama19418 | INHIBITOR OF APOPTOSIS |
Ama19419 | RNA POLYMERASE II TRANSCRIPTIONAL COACTIVATOR |
Ama19421 | GLYCOPROTEIN HORMONE RECEPTOR |
Ama19422 | VOLTAGE-GATED POTASSIUM CHANNEL |
Ama19424 | IKB KINASE |
Ama19426 | AMP-BINDING DOMAIN-CONTAINING PROTEIN |
Ama19427 | CADHERIN DOMAIN-CONTAINING PROTEIN |
Ama19428 | |
Ama19429 | AMINOACYLASE-1 |
Ama19431 | |
Ama19432 | |
Ama19433 | MITOCHONDRIAL ATP SYNTHASE COUPLING FACTOR B |
Ama19435 | EXS-RELATED PROTEIN |
Ama19437 | EXS-RELATED PROTEIN |
Ama19439 | UBIQUITIN-LIKE DOMAIN-CONTAINING PROTEIN |