The Deep-Sea Chemosymbiotic Clam Archivesica marissinica is a species of deep-sea clam in the family Vesicomyidae, commonly found at the Haima cold seep on the northwest continental slope of the South China Sea. This species is well-adapted to extreme environments and relies on symbiotic sulfur-oxidizing bacteria housed in its gills for nutrition. Archivesica marissinica plays a significant role in cold seep ecosystems by contributing to nutrient cycling and supporting diverse microbial and faunal communities.
Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
---|---|---|---|---|---|---|
Archivesica marissinica | Mollusca | Deep-Sea Clam | Hydrothermal vent | 1,361 | Haima cold seep in the South China Sea | 2291877 |
Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
---|---|---|---|---|---|---|---|---|
ASM1484369v1 | 1.5Gb | Chromosome | 2020 | JABXNX01 | Hong Kong Baptist University | PRJNA629898 | 93.50% | 28,949 |
Title | Journal | Pubmed ID |
---|---|---|
Host-Endosymbiont Genome Integration in a Deep-Sea Chemosymbiotic Clam | Molecular Biology and Evolution | 32956455 |
Gene ID | Description |
---|---|
Ama19117 | LSM1 |
Ama19118 | NUCLEOTIDE-SUGAR TRANSMEMBRANE TRANSPORTER |
Ama19119 | |
Ama19120 | |
Ama19121 | CARBOHYDRATE SULFOTRANSFERASE 15 |
Ama19122 | NADH-UBIQUINONE OXIDOREDUCTASE 13 KD-B SUBUNIT |
Ama19123 | TRANSMEMBRANE PROTEIN 187 |
Ama19124 | HOST CELL FACTOR |
Ama19125 | HOST CELL FACTOR |
Ama19126 | N-ACETYLGALACTOSAMINYLTRANSFERASE |
Ama19127 | CCHC-TYPE DOMAIN-CONTAINING PROTEIN |
Ama19128 | |
Ama19129 | CDNA SEQUENCE BC048562 |
Ama19130 | GLUTAMINE-TRNA LIGASE |
Ama19131 | |
Ama19135 | |
Ama19137 | |
Ama19138 | TRANSKETOLASE |
Ama19139 | |
Ama19140 | ATP-BINDING CASSETTE SUB-FAMILY C |
Ama19141 | ATP-BINDING CASSETTE SUB-FAMILY C |
Ama19143 | RHO FAMILY GTPASE |
Ama19144 | RHO FAMILY GTPASE |
Ama19145 | INTER-ALPHA-TRYPSIN INHIBITOR HEAVY CHAIN FAMILY MEMBER |
Ama19146 | INTER-ALPHA-TRYPSIN INHIBITOR HEAVY CHAIN FAMILY MEMBER |
Ama19147 | HEH2P |
Ama19148 | |
Ama19149 | CXC DOMAIN-CONTAINING PROTEIN-RELATED |
Ama19150 | MITOCHONDRIAL DICARBOXYLATE CARRIER-RELATED |
Ama19151 | SULFATE TRANSPORTER |
Ama19152 | |
Ama19153 | |
Ama19156 | SULFATE TRANSPORTER |
Ama19157 | N-ACETYLTRANSFERASE-RELATED |
Ama19158 | PURPLE ACID PHOSPHATASE |
Ama19159 | |
Ama19160 | MITOGEN-ACTIVATED PROTEIN KINASE |
Ama19161 | ADP RIBOSYLATION FACTOR-RELATED |
Ama19162 | CELL DIVISION PROTEIN KINASE |
Ama19163 | METABOTROPIC GLUTAMATE RECEPTOR |
Ama19165 | KRUEPPEL-LIKE TRANSCRIPTION FACTOR |
Ama19166 | UBIQUITIN CARBOXYL-TERMINAL HYDROLASE |
Ama19167 | GUANYLYL CYCLASE |
Ama19168 | UNCHARACTERIZED |
Ama19170 | |
Ama19171 | DYNEIN HEAVY CHAIN 1, AXONEMAL-LIKE PROTEIN |
Ama19172 | DYNEIN HEAVY CHAIN 1, AXONEMAL-LIKE PROTEIN |
Ama19173 | DYNEIN HEAVY CHAIN |
Ama19174 | DYNEIN HEAVY CHAIN |
Ama19175 | DYNEIN HEAVY CHAIN 1, AXONEMAL-LIKE PROTEIN |