The Deep-Sea Chemosymbiotic Clam Archivesica marissinica is a species of deep-sea clam in the family Vesicomyidae, commonly found at the Haima cold seep on the northwest continental slope of the South China Sea. This species is well-adapted to extreme environments and relies on symbiotic sulfur-oxidizing bacteria housed in its gills for nutrition. Archivesica marissinica plays a significant role in cold seep ecosystems by contributing to nutrient cycling and supporting diverse microbial and faunal communities.
Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
---|---|---|---|---|---|---|
Archivesica marissinica | Mollusca | Deep-Sea Clam | Hydrothermal vent | 1,361 | Haima cold seep in the South China Sea | 2291877 |
Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
---|---|---|---|---|---|---|---|---|
ASM1484369v1 | 1.5Gb | Chromosome | 2020 | JABXNX01 | Hong Kong Baptist University | PRJNA629898 | 93.50% | 28,949 |
Title | Journal | Pubmed ID |
---|---|---|
Host-Endosymbiont Genome Integration in a Deep-Sea Chemosymbiotic Clam | Molecular Biology and Evolution | 32956455 |
Gene ID | Description |
---|---|
Ama20675 | INOSITOL 5-PHOSPHATASE |
Ama20676 | RPA-INTERACTING PROTEIN RPAIN |
Ama20680 | UBIQUITIN-LIKE DOMAIN-CONTAINING PROTEIN |
Ama20682 | HUNTINGTIN INTERACTING PROTEIN 1 |
Ama20683 | |
Ama20684 | 52 KDA REPRESSOR OF THE INHIBITOR OF THE PROTEIN KINASE-LIKE PROTEIN-RELATED |
Ama20685 | |
Ama20686 | 52 KDA REPRESSOR OF THE INHIBITOR OF THE PROTEIN KINASE-LIKE PROTEIN-RELATED |
Ama20687 | - |
Ama20688 | |
Ama20690 | RIBOSOMAL PROTEIN S6 KINASE |
Ama20693 | RIBOSOMAL PROTEIN S6 KINASE |
Ama20695 | UNCHARACTERIZED PROTEIN C1ORF50 |
Ama20696 | |
Ama206_5db7b01a | LIN-24 (TWENTY-FOUR) LIKE |
Ama20702 | UNCHARACTERIZED PROTEIN C1ORF50 |
Ama20703 | |
Ama20704 | S-ADENOSYL-L-METHIONINE-DEPENDENT TRNA 4-DEMETHYLWYOSINE SYNTHASE |
Ama20705 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
Ama20708 | |
Ama20709 | PUTATIVE-RELATED |
Ama20710 | PUTATIVE-RELATED |
Ama20711 | |
Ama20712 | IONOTROPIC GLUTAMATE RECEPTOR |
Ama20713 | E3 UBIQUITIN-PROTEIN LIGASE HECTD4-RELATED |
Ama20714 | E3 UBIQUITIN-PROTEIN LIGASE HECTD4-RELATED |
Ama20721 | E3 UBIQUITIN-PROTEIN LIGASE HECTD4-RELATED |
Ama20722 | FRUCTOSE-BISPHOSPHATE ALDOLASE |
Ama20724 | LIM/HOMEOBOX PROTEIN LHX |
Ama20726 | LIM/HOMEOBOX PROTEIN LHX |
Ama20730 | SARM1 |
Ama20731 | LEYDIG CELL TUMOR 10 KDA PROTEIN HOMOLOG |
Ama20732 | SARM1 |
Ama20734 | COLLAGEN ALPHA |
Ama20736 | UNNAMED PRODUCT |
Ama20737 | MANNOSYL PHOSPHORYLINOSITOL CERAMIDE SYNTHASE |
Ama20739 | DER1-LIKE PROTEIN, DERLIN |
Ama20740 | - |
Ama20741 | BREAST CANCER METASTASIS-SUPPRESSOR 1 |
Ama20742 | |
Ama20743 | |
Ama20744 | MITOCHONDRIAL RIBOSOMAL PROTEIN 63 |
Ama20745 | PEPTIDYL-TRNA HYDROLASE 2 |
Ama20747 | |
Ama20749 | PROLYL 4-HYDROXYLASE ALPHA SUBUNIT |
Ama20750 | PUTATIVE-RELATED |
Ama20751 | LATROPHILIN RECEPTOR-LIKE PROTEIN A |
Ama20752 | RAS-RELATED PROTEIN RAB |
Ama20753 | H2HPP ISOMERASE |
Ama20754 |