About Archivesica marissinica

The Deep-Sea Chemosymbiotic Clam Archivesica marissinica is a species of deep-sea clam in the family Vesicomyidae, commonly found at the Haima cold seep on the northwest continental slope of the South China Sea. This species is well-adapted to extreme environments and relies on symbiotic sulfur-oxidizing bacteria housed in its gills for nutrition. Archivesica marissinica plays a significant role in cold seep ecosystems by contributing to nutrient cycling and supporting diverse microbial and faunal communities.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Archivesica marissinicaMolluscaDeep-Sea ClamHydrothermal vent1,361Haima cold seep in the South China Sea2291877

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
ASM1484369v11.5GbChromosome2020JABXNX01Hong Kong Baptist UniversityPRJNA62989893.50%28,949

References
TitleJournalPubmed ID
Host-Endosymbiont Genome Integration in a Deep-Sea Chemosymbiotic ClamMolecular Biology and Evolution32956455

Gene Information

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Gene IDDescription
Ama20899TRANSCRIPTASE, PUTATIVE-RELATED-RELATED
Ama20900DUF3504 DOMAIN-CONTAINING PROTEIN
Ama20901
Ama20903SET DOMAIN-CONTAINING PROTEIN-RELATED
Ama20904
Ama20906
Ama20907SET DOMAIN-CONTAINING PROTEIN-RELATED
Ama20909MAX DIMERIZATION, MAD
Ama20910TRANSMEMBRANE PROTEIN 248-LIKE
Ama20911
Ama20912
Ama20913VESICLE PROTEIN SORTING-ASSOCIATED
Ama20914
Ama20915
Ama20917DNA REPAIR DEAD HELICASE RAD3/XP-D SUBFAMILY MEMBER
Ama20919
Ama20922T-BOX PROTEIN-RELATED
Ama20926HILLARIN
Ama20927BREAST CARCINOMA AMPLIFIED SEQUENCE 3
Ama20928
Ama20929
Ama20930REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Ama20931MITOCHONDRIAL FISSION PROCESS PROTEIN 1
Ama20934RH14732P
Ama20935DNAJ HOMOLOG SUBFAMILY C MEMBER 24
Ama20936RAB GTPASE-ACTIVATING PROTEIN 1-LIKE
Ama20938TRIMERIC INTRACELLULAR CATION CHANNEL
Ama20939OSMOSIS RESPONSIVE FACTOR
Ama20940ATP-DEPENDENT DNA HELICASE
Ama20941SERINE/THREONINE-PROTEIN KINASE UNC-51-RELATED
Ama20943CONTACTIN 5
Ama20944TUDOR DOMAIN CONTAINING PROTEIN
Ama20945AGAP005574-PA
Ama20946GERANYLGERANYL DIPHOSPHATE REDUCTASE
Ama20947FI23527P1
Ama20948TRNA (CYTOSINE(38)-C(5))-METHYLTRANSFERASE
Ama20949NEUROTRANSMITTER GATED ION CHANNEL
Ama20950ZINC METALLOPROTEINASE-RELATED
Ama20951MATRIX METALLOPROTEINASE
Ama20952
Ama20954
Ama20955
Ama20956WD40 REPEAT PROTEIN
Ama20957BLR7054 PROTEIN
Ama20958PEPTIDASE
Ama20959GAMMA GLUTAMYL TRANSPEPTIDASE
Ama20960GAMMA GLUTAMYL TRANSPEPTIDASE
Ama20961VOLTAGE-GATED POTASSIUM CHANNEL
Ama20962VOLTAGE-GATED POTASSIUM CHANNEL
Ama20963GAMMA GLUTAMYL TRANSPEPTIDASE
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