About Archivesica marissinica

The Deep-Sea Chemosymbiotic Clam Archivesica marissinica is a species of deep-sea clam in the family Vesicomyidae, commonly found at the Haima cold seep on the northwest continental slope of the South China Sea. This species is well-adapted to extreme environments and relies on symbiotic sulfur-oxidizing bacteria housed in its gills for nutrition. Archivesica marissinica plays a significant role in cold seep ecosystems by contributing to nutrient cycling and supporting diverse microbial and faunal communities.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Archivesica marissinicaMolluscaDeep-Sea ClamHydrothermal vent1,361Haima cold seep in the South China Sea2291877

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
ASM1484369v11.5GbChromosome2020JABXNX01Hong Kong Baptist UniversityPRJNA62989893.50%28,949

References
TitleJournalPubmed ID
Host-Endosymbiont Genome Integration in a Deep-Sea Chemosymbiotic ClamMolecular Biology and Evolution32956455

Gene Information

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Gene IDDescription
Ama21164
Ama21165
Ama21167
Ama21168NITRIC OXIDE SYNTHASE OXYGENASE
Ama21169NITRIC OXIDE SYNTHASE OXYGENASE
Ama21170NITRIC OXIDE SYNTHASE OXYGENASE
Ama21171SERINE/THREONINE/TYROSINE-INTERACTING-LIKE PROTEIN 1
Ama21172MALATE AND LACTATE DEHYDROGENASE
Ama21173FI19613P1
Ama21174CT120 PROTEIN
Ama21175
Ama21183TRANSMEMBRANE PROTEIN
Ama21184
Ama21185COLLAGEN ALPHA
Ama21186COLLAGEN ALPHA
Ama21188
Ama21190ANKYRIN REPEAT AND LEM DOMAIN-CONTAINING PROTEIN 2
Ama21191
Ama21192
Ama21193THAP DOMAIN PROTEIN
Ama21194DNA-REPAIR PROTEIN XRCC1
Ama21195
Ama21198
Ama21199INHIBITOR OF APOPTOSIS
Ama211_5db7b01aCYSTEINE-RICH MOTOR NEURON 1 PROTEIN
Ama21200RNA POLYMERASE II TRANSCRIPTIONAL COACTIVATOR
Ama21201
Ama21202DIMETHYLANILINE MONOOXYGENASE
Ama21203
Ama21204INTEGRASE CATALYTIC DOMAIN-CONTAINING PROTEIN
Ama21208DIMETHYLANILINE MONOOXYGENASE
Ama21209
Ama21210HEH2P
Ama21211LIPOATE-PROTEIN LIGASE
Ama21212OLIGORIBONUCLEASE, MITOCHONDRIAL
Ama21213
Ama21214OLIGORIBONUCLEASE, MITOCHONDRIAL
Ama21215
Ama21216CT120 PROTEIN
Ama21217
Ama21218CXC DOMAIN-CONTAINING PROTEIN-RELATED
Ama21219SODIUM/CHLORIDE DEPENDENT TRANSPORTER
Ama21221
Ama21222THADA/DEATH RECEPTOR INTERACTING PROTEIN
Ama21223
Ama21224CXC DOMAIN-CONTAINING PROTEIN-RELATED
Ama21225
Ama21226CYSTEINE PROTEASE FAMILY C1-RELATED
Ama21227CXC DOMAIN-CONTAINING PROTEIN-RELATED
Ama21228
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