The Deep-Sea Chemosymbiotic Clam Archivesica marissinica is a species of deep-sea clam in the family Vesicomyidae, commonly found at the Haima cold seep on the northwest continental slope of the South China Sea. This species is well-adapted to extreme environments and relies on symbiotic sulfur-oxidizing bacteria housed in its gills for nutrition. Archivesica marissinica plays a significant role in cold seep ecosystems by contributing to nutrient cycling and supporting diverse microbial and faunal communities.
Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
---|---|---|---|---|---|---|
Archivesica marissinica | Mollusca | Deep-Sea Clam | Hydrothermal vent | 1,361 | Haima cold seep in the South China Sea | 2291877 |
Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
---|---|---|---|---|---|---|---|---|
ASM1484369v1 | 1.5Gb | Chromosome | 2020 | JABXNX01 | Hong Kong Baptist University | PRJNA629898 | 93.50% | 28,949 |
Title | Journal | Pubmed ID |
---|---|---|
Host-Endosymbiont Genome Integration in a Deep-Sea Chemosymbiotic Clam | Molecular Biology and Evolution | 32956455 |
Gene ID | Description |
---|---|
Ama21164 | |
Ama21165 | |
Ama21167 | |
Ama21168 | NITRIC OXIDE SYNTHASE OXYGENASE |
Ama21169 | NITRIC OXIDE SYNTHASE OXYGENASE |
Ama21170 | NITRIC OXIDE SYNTHASE OXYGENASE |
Ama21171 | SERINE/THREONINE/TYROSINE-INTERACTING-LIKE PROTEIN 1 |
Ama21172 | MALATE AND LACTATE DEHYDROGENASE |
Ama21173 | FI19613P1 |
Ama21174 | CT120 PROTEIN |
Ama21175 | |
Ama21183 | TRANSMEMBRANE PROTEIN |
Ama21184 | |
Ama21185 | COLLAGEN ALPHA |
Ama21186 | COLLAGEN ALPHA |
Ama21188 | |
Ama21190 | ANKYRIN REPEAT AND LEM DOMAIN-CONTAINING PROTEIN 2 |
Ama21191 | |
Ama21192 | |
Ama21193 | THAP DOMAIN PROTEIN |
Ama21194 | DNA-REPAIR PROTEIN XRCC1 |
Ama21195 | |
Ama21198 | |
Ama21199 | INHIBITOR OF APOPTOSIS |
Ama211_5db7b01a | CYSTEINE-RICH MOTOR NEURON 1 PROTEIN |
Ama21200 | RNA POLYMERASE II TRANSCRIPTIONAL COACTIVATOR |
Ama21201 | |
Ama21202 | DIMETHYLANILINE MONOOXYGENASE |
Ama21203 | |
Ama21204 | INTEGRASE CATALYTIC DOMAIN-CONTAINING PROTEIN |
Ama21208 | DIMETHYLANILINE MONOOXYGENASE |
Ama21209 | |
Ama21210 | HEH2P |
Ama21211 | LIPOATE-PROTEIN LIGASE |
Ama21212 | OLIGORIBONUCLEASE, MITOCHONDRIAL |
Ama21213 | |
Ama21214 | OLIGORIBONUCLEASE, MITOCHONDRIAL |
Ama21215 | |
Ama21216 | CT120 PROTEIN |
Ama21217 | |
Ama21218 | CXC DOMAIN-CONTAINING PROTEIN-RELATED |
Ama21219 | SODIUM/CHLORIDE DEPENDENT TRANSPORTER |
Ama21221 | |
Ama21222 | THADA/DEATH RECEPTOR INTERACTING PROTEIN |
Ama21223 | |
Ama21224 | CXC DOMAIN-CONTAINING PROTEIN-RELATED |
Ama21225 | |
Ama21226 | CYSTEINE PROTEASE FAMILY C1-RELATED |
Ama21227 | CXC DOMAIN-CONTAINING PROTEIN-RELATED |
Ama21228 |