About Archivesica marissinica

The Deep-Sea Chemosymbiotic Clam Archivesica marissinica is a species of deep-sea clam in the family Vesicomyidae, commonly found at the Haima cold seep on the northwest continental slope of the South China Sea. This species is well-adapted to extreme environments and relies on symbiotic sulfur-oxidizing bacteria housed in its gills for nutrition. Archivesica marissinica plays a significant role in cold seep ecosystems by contributing to nutrient cycling and supporting diverse microbial and faunal communities.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Archivesica marissinicaMolluscaDeep-Sea ClamHydrothermal vent1,361Haima cold seep in the South China Sea2291877

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
ASM1484369v11.5GbChromosome2020JABXNX01Hong Kong Baptist UniversityPRJNA62989893.50%28,949

References
TitleJournalPubmed ID
Host-Endosymbiont Genome Integration in a Deep-Sea Chemosymbiotic ClamMolecular Biology and Evolution32956455

Gene Information

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Gene IDDescription
Ama21230SODIUM/CHLORIDE DEPENDENT TRANSPORTER
Ama21231HAT FAMILY DIMERISATION DOMAINCONTAINING PROTEIN-RELATED
Ama21232TRANSPOSABLE ELEMENT-RELATED
Ama21233PIGGYBAC TRANSPOSABLE ELEMENT-DERIVED PROTEIN 4
Ama2123452 KDA REPRESSOR OF THE INHIBITOR OF THE PROTEIN KINASE-LIKE PROTEIN-RELATED
Ama21236
Ama21237GAMMA GLUTAMYL TRANSPEPTIDASE
Ama21238AP ENDONUCLEASE
Ama21240
Ama21241
Ama21242
Ama21243UNCHARACTERIZED
Ama21244CALPONIN HOMOLOGY DOMAIN-CONTAINING PROTEIN DDB_G0272472-RELATED
Ama21245PROTEIN PHOSPHATASE
Ama21246-
Ama21247PROTEIN ABHD11
Ama21248RAS, DI-RAS, AND RHEB FAMILY MEMBERS OF SMALL GTPASE SUPERFAMILY
Ama21249UNCHARACTERIZED
Ama21250HYDROLASE
Ama21251CELL DEATH ACTIVATOR CIDE
Ama21252SAPOSIN-RELATED
Ama21253PROTEIN CBG16428
Ama21254ZINC FINGER PROTEIN
Ama21255
Ama21256PUTATIVE-RELATED
Ama21257L1 TRANSPOSABLE ELEMENT-RELATED
Ama21258NADH DEHYDROGENASE UBIQUINONE IRON-SULFUR PROTEIN 8, MITOCHONDRIAL
Ama21260OS01G0282866 PROTEIN
Ama21261TUBULIN
Ama21262
Ama21263FIBRONECTIN TYPE-III DOMAIN-CONTAINING PROTEIN-RELATED
Ama21264EUKARYOTIC TRANSLATION INITATION FACTOR 3, SUBUNIT 8 EIF3S8 -RELATED
Ama21265UNNAMED PRODUCT
Ama21266TRANSPOSABLE ELEMENT-RELATED
Ama21267
Ama21268LIPOMA HMGIC FUSION PARTNER-LIKE PROTEIN
Ama21271
Ama21276UNCHARACTERIZED
Ama21277LEO1 PROTEIN
Ama21278DNA REPLICATION-RELATED ELEMENT FACTOR, ISOFORM A
Ama21279
Ama21280PHAGE_INTEGRASE DOMAIN-CONTAINING PROTEIN
Ama21281REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Ama21282FIBRINOGEN/TENASCIN/ANGIOPOEITIN
Ama21283
Ama21285PDZ AND LIM DOMAIN PROTEIN ZASP
Ama21286ZINC FINGER BED DOMAIN-CONTAINING PROTEIN 4
Ama21287RING ZINC FINGER
Ama21288NOTCH LIGAND FAMILY MEMBER
Ama21290DUF853 DOMAIN-CONTAINING PROTEIN
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