The Deep-Sea Chemosymbiotic Clam Archivesica marissinica is a species of deep-sea clam in the family Vesicomyidae, commonly found at the Haima cold seep on the northwest continental slope of the South China Sea. This species is well-adapted to extreme environments and relies on symbiotic sulfur-oxidizing bacteria housed in its gills for nutrition. Archivesica marissinica plays a significant role in cold seep ecosystems by contributing to nutrient cycling and supporting diverse microbial and faunal communities.
Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
---|---|---|---|---|---|---|
Archivesica marissinica | Mollusca | Deep-Sea Clam | Hydrothermal vent | 1,361 | Haima cold seep in the South China Sea | 2291877 |
Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
---|---|---|---|---|---|---|---|---|
ASM1484369v1 | 1.5Gb | Chromosome | 2020 | JABXNX01 | Hong Kong Baptist University | PRJNA629898 | 93.50% | 28,949 |
Title | Journal | Pubmed ID |
---|---|---|
Host-Endosymbiont Genome Integration in a Deep-Sea Chemosymbiotic Clam | Molecular Biology and Evolution | 32956455 |
Gene ID | Description |
---|---|
Ama21364 | MEMBRANE-ASSOCIATED PROGESTERONE RECEPTOR COMPONENT-RELATED |
Ama21365 | SESQUIPEDALIAN |
Ama21366 | |
Ama21367 | TRANSCRIPTASE, PUTATIVE-RELATED-RELATED |
Ama21368 | PHOSPHATIDYLINOSITOL SYNTHASE |
Ama21369 | |
Ama21373 | MEIOTIC NUCLEAR DIVISION PROTEIN 1 HOMOLOG |
Ama21374 | TALIN |
Ama21375 | TALIN |
Ama21379 | TRAF-TYPE ZINC FINGER PROTEIN-RELATED |
Ama21380 | MITOCHONDRIAL IMPORT INNER MEMBRANE TRANSLOCASE SUBUNIT TIM10 |
Ama21381 | ZINC FINGER PROTEIN |
Ama21383 | FATTY ACID BINDING PROTEIN |
Ama21384 | 52 KDA REPRESSOR OF THE INHIBITOR OF THE PROTEIN KINASE-LIKE PROTEIN-RELATED |
Ama21385 | FATTY ACID BINDING PROTEIN |
Ama21387 | |
Ama21388 | |
Ama21390 | PDZ DOMAIN CONTAINING PROTEIN |
Ama21393 | MYOSIN |
Ama21394 | MYOSIN HEAVY CHAIN, NON-MUSCLE |
Ama21395 | NUCLEASE-RELATED |
Ama21396 | DISCOIDIN, CUB, EGF, LAMININ , AND ZINC METALLOPROTEASE DOMAIN CONTAINING |
Ama21397 | SYNAPTIC VESICLE GLYCOPROTEIN 2 |
Ama21399 | |
Ama21400 | D-DOPACHROME DECARBOXYLASE |
Ama21401 | INTER-ALPHA-TRYPSIN INHIBITOR HEAVY CHAIN FAMILY MEMBER |
Ama21402 | PTD012 PROTEIN |
Ama21403 | TRANSGELIN |
Ama21404 | CXC DOMAIN-CONTAINING PROTEIN-RELATED |
Ama21405 | CXC DOMAIN-CONTAINING PROTEIN-RELATED |
Ama21406 | USP DOMAIN-CONTAINING PROTEIN |
Ama21407 | |
Ama21408 | |
Ama21409 | MONOCARBOXYLATE TRANSPORTER |
Ama21410 | |
Ama21411 | |
Ama21412 | |
Ama21413 | |
Ama21414 | |
Ama21415 | |
Ama21416 | |
Ama21418 | REPETIN |
Ama21419 | FMS INTERACTING PROTEIN |
Ama21420 | |
Ama21421 | IQ DOMAIN-CONTAINING PROTEIN D |
Ama21422 | MYOTONIC DYSTROPHY S/T KINASE-RELATED |
Ama21424 | |
Ama21426 | PHOSPHATIDYLINOSITOL GLYCAN, CLASS N |
Ama21427 | |
Ama21429 |