About Archivesica marissinica

The Deep-Sea Chemosymbiotic Clam Archivesica marissinica is a species of deep-sea clam in the family Vesicomyidae, commonly found at the Haima cold seep on the northwest continental slope of the South China Sea. This species is well-adapted to extreme environments and relies on symbiotic sulfur-oxidizing bacteria housed in its gills for nutrition. Archivesica marissinica plays a significant role in cold seep ecosystems by contributing to nutrient cycling and supporting diverse microbial and faunal communities.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Archivesica marissinicaMolluscaDeep-Sea ClamHydrothermal vent1,361Haima cold seep in the South China Sea2291877

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
ASM1484369v11.5GbChromosome2020JABXNX01Hong Kong Baptist UniversityPRJNA62989893.50%28,949

References
TitleJournalPubmed ID
Host-Endosymbiont Genome Integration in a Deep-Sea Chemosymbiotic ClamMolecular Biology and Evolution32956455

Gene Information

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Gene IDDescription
Ama21295RAS GTPASE-ACTIVATING PROTEINS
Ama21296PELOTA
Ama21297
Ama212_5db7b01aDI-N-ACETYLCHITOBIASE
Ama21300TRANSPOSON
Ama21301G PROTEIN-COUPLED RECEPTOR
Ama21305CXC DOMAIN-CONTAINING PROTEIN-RELATED
Ama21306CXC DOMAIN-CONTAINING PROTEIN-RELATED
Ama21307CXC DOMAIN-CONTAINING PROTEIN-RELATED
Ama21308HEH2P
Ama21309TP53-REGULATED INHIBITOR OF APOPTOSIS 1
Ama21311
Ama21313DIPHTHAMIDE BIOSYNTHESIS PROTEIN
Ama21314NEUROTRANSMITTER GATED ION CHANNEL
Ama21315NEUROTRANSMITTER GATED ION CHANNEL
Ama21316CXC DOMAIN-CONTAINING PROTEIN-RELATED
Ama21317
Ama21319REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Ama21320THAP DOMAIN PROTEIN
Ama21323
Ama21325RAS-ASSOCIATING DOMAIN-CONTAINING PROTEIN
Ama21326RAS-ASSOCIATING DOMAIN-CONTAINING PROTEIN
Ama21327
Ama21328VOLTAGE-GATED POTASSIUM CHANNEL
Ama21329BTB/POZ DOMAIN-CONTAINING ADAPTER FOR CUL3-MEDIATED RHOA DEGRADATION PROTEIN FAMILY MEMBER
Ama21330
Ama21331TRANSLATIONAL ACTIVATOR GCN1-RELATED
Ama21332TRANSLATIONAL ACTIVATOR GCN1-RELATED
Ama21333TRANSLATIONAL ACTIVATOR GCN1-RELATED
Ama21334
Ama21335
Ama21336
Ama21337VOLTAGE-GATED POTASSIUM CHANNEL
Ama21338ZINC FINGER SWIM DOMAIN-CONTAINING PROTEIN 7
Ama21344GLYCOSYLTRANSFERASE 14 FAMILY MEMBER
Ama21346G PROTEIN-COUPLED RECEPTOR
Ama21349
Ama21350LEUCINE-RICH REPEAT-CONTAINING PROTEIN 34
Ama21351L1 TRANSPOSABLE ELEMENT-RELATED
Ama21352COLLAGEN ALPHA
Ama21353
Ama21354MYOSIN
Ama21355MYOSIN
Ama21357PUTATIVE-RELATED
Ama21358
Ama21359CARBOXYLESTERASE
Ama21360HEPARAN SULFATE SULFOTRANSFERASE
Ama21361
Ama21362-
Ama21363
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