The Deep-Sea Chemosymbiotic Clam Archivesica marissinica is a species of deep-sea clam in the family Vesicomyidae, commonly found at the Haima cold seep on the northwest continental slope of the South China Sea. This species is well-adapted to extreme environments and relies on symbiotic sulfur-oxidizing bacteria housed in its gills for nutrition. Archivesica marissinica plays a significant role in cold seep ecosystems by contributing to nutrient cycling and supporting diverse microbial and faunal communities.
Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
---|---|---|---|---|---|---|
Archivesica marissinica | Mollusca | Deep-Sea Clam | Hydrothermal vent | 1,361 | Haima cold seep in the South China Sea | 2291877 |
Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
---|---|---|---|---|---|---|---|---|
ASM1484369v1 | 1.5Gb | Chromosome | 2020 | JABXNX01 | Hong Kong Baptist University | PRJNA629898 | 93.50% | 28,949 |
Title | Journal | Pubmed ID |
---|---|---|
Host-Endosymbiont Genome Integration in a Deep-Sea Chemosymbiotic Clam | Molecular Biology and Evolution | 32956455 |
Gene ID | Description |
---|---|
Ama21295 | RAS GTPASE-ACTIVATING PROTEINS |
Ama21296 | PELOTA |
Ama21297 | |
Ama212_5db7b01a | DI-N-ACETYLCHITOBIASE |
Ama21300 | TRANSPOSON |
Ama21301 | G PROTEIN-COUPLED RECEPTOR |
Ama21305 | CXC DOMAIN-CONTAINING PROTEIN-RELATED |
Ama21306 | CXC DOMAIN-CONTAINING PROTEIN-RELATED |
Ama21307 | CXC DOMAIN-CONTAINING PROTEIN-RELATED |
Ama21308 | HEH2P |
Ama21309 | TP53-REGULATED INHIBITOR OF APOPTOSIS 1 |
Ama21311 | |
Ama21313 | DIPHTHAMIDE BIOSYNTHESIS PROTEIN |
Ama21314 | NEUROTRANSMITTER GATED ION CHANNEL |
Ama21315 | NEUROTRANSMITTER GATED ION CHANNEL |
Ama21316 | CXC DOMAIN-CONTAINING PROTEIN-RELATED |
Ama21317 | |
Ama21319 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
Ama21320 | THAP DOMAIN PROTEIN |
Ama21323 | |
Ama21325 | RAS-ASSOCIATING DOMAIN-CONTAINING PROTEIN |
Ama21326 | RAS-ASSOCIATING DOMAIN-CONTAINING PROTEIN |
Ama21327 | |
Ama21328 | VOLTAGE-GATED POTASSIUM CHANNEL |
Ama21329 | BTB/POZ DOMAIN-CONTAINING ADAPTER FOR CUL3-MEDIATED RHOA DEGRADATION PROTEIN FAMILY MEMBER |
Ama21330 | |
Ama21331 | TRANSLATIONAL ACTIVATOR GCN1-RELATED |
Ama21332 | TRANSLATIONAL ACTIVATOR GCN1-RELATED |
Ama21333 | TRANSLATIONAL ACTIVATOR GCN1-RELATED |
Ama21334 | |
Ama21335 | |
Ama21336 | |
Ama21337 | VOLTAGE-GATED POTASSIUM CHANNEL |
Ama21338 | ZINC FINGER SWIM DOMAIN-CONTAINING PROTEIN 7 |
Ama21344 | GLYCOSYLTRANSFERASE 14 FAMILY MEMBER |
Ama21346 | G PROTEIN-COUPLED RECEPTOR |
Ama21349 | |
Ama21350 | LEUCINE-RICH REPEAT-CONTAINING PROTEIN 34 |
Ama21351 | L1 TRANSPOSABLE ELEMENT-RELATED |
Ama21352 | COLLAGEN ALPHA |
Ama21353 | |
Ama21354 | MYOSIN |
Ama21355 | MYOSIN |
Ama21357 | PUTATIVE-RELATED |
Ama21358 | |
Ama21359 | CARBOXYLESTERASE |
Ama21360 | HEPARAN SULFATE SULFOTRANSFERASE |
Ama21361 | |
Ama21362 | - |
Ama21363 |