About Archivesica marissinica

The Deep-Sea Chemosymbiotic Clam Archivesica marissinica is a species of deep-sea clam in the family Vesicomyidae, commonly found at the Haima cold seep on the northwest continental slope of the South China Sea. This species is well-adapted to extreme environments and relies on symbiotic sulfur-oxidizing bacteria housed in its gills for nutrition. Archivesica marissinica plays a significant role in cold seep ecosystems by contributing to nutrient cycling and supporting diverse microbial and faunal communities.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Archivesica marissinicaMolluscaDeep-Sea ClamHydrothermal vent1,361Haima cold seep in the South China Sea2291877

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
ASM1484369v11.5GbChromosome2020JABXNX01Hong Kong Baptist UniversityPRJNA62989893.50%28,949

References
TitleJournalPubmed ID
Host-Endosymbiont Genome Integration in a Deep-Sea Chemosymbiotic ClamMolecular Biology and Evolution32956455

Gene Information

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Gene IDDescription
Ama21430
Ama21431NITRIC OXIDE SYNTHASE-RELATED
Ama21432CHAPERONIN
Ama2143530S RIBOSOMAL PROTEIN S12 FAMILY MEMBER
Ama21436RAS-ASSOCIATING DOMAIN-CONTAINING PROTEIN
Ama21437UNCHARACTERIZED
Ama2143930S RIBOSOMAL PROTEIN S12 FAMILY MEMBER
Ama21440RAS-ASSOCIATING DOMAIN-CONTAINING PROTEIN
Ama21443SLEI FAMILY PROTEIN
Ama21444
Ama21445
Ama21455FIBRINOGEN/TENASCIN/ANGIOPOEITIN
Ama21456
Ama21457
Ama21459
Ama21460DYNACTIN 1-RELATED MICROTUBULE-BINDING
Ama21461UNC-93 RELATED
Ama21463UBIQUITIN-CONJUGATING ENZYME E2
Ama21464CYTOCHROME C OXIDASE POLYPEPTIDE VIA
Ama21465MICRORNA PROCESSOR COMPLEX SUBUNIT DGCR8
Ama21466MICRORNA PROCESSOR COMPLEX SUBUNIT DGCR8
Ama21467
Ama21468
Ama21469
Ama21470CARBOHYDRATE SULFOTRANSFERASE
Ama21472
Ama21473
Ama21474
Ama21475
Ama21476THAP DOMAIN PROTEIN
Ama21477
Ama21480DEATH DOMAIN-CONTAINING PROTEIN
Ama21481
Ama21482REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Ama21483REVERSE TRANSCRIPTASES
Ama21484
Ama21485EXONUCLEASE, PHAGE-TYPE/RECB, C-TERMINAL DOMAIN-CONTAINING PROTEIN
Ama21486HAT FAMILY DIMERISATION DOMAINCONTAINING PROTEIN-RELATED
Ama21487HAT FAMILY DIMERISATION DOMAINCONTAINING PROTEIN-RELATED
Ama21488PUTATIVE-RELATED
Ama21489
Ama21493
Ama21494
Ama21495RNA POLYMERASE II TRANSCRIPTIONAL COACTIVATOR
Ama21496INHIBITOR OF APOPTOSIS
Ama21497
Ama21498REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Ama21499
Ama214_5db7b01aCTX-RELATED TYPE I TRANSMEMBRANE PROTEIN
Ama21501PIGGYBAC TRANSPOSABLE ELEMENT-DERIVED PROTEIN 4
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