About Archivesica marissinica

The Deep-Sea Chemosymbiotic Clam Archivesica marissinica is a species of deep-sea clam in the family Vesicomyidae, commonly found at the Haima cold seep on the northwest continental slope of the South China Sea. This species is well-adapted to extreme environments and relies on symbiotic sulfur-oxidizing bacteria housed in its gills for nutrition. Archivesica marissinica plays a significant role in cold seep ecosystems by contributing to nutrient cycling and supporting diverse microbial and faunal communities.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Archivesica marissinicaMolluscaDeep-Sea ClamHydrothermal vent1,361Haima cold seep in the South China Sea2291877

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
ASM1484369v11.5GbChromosome2020JABXNX01Hong Kong Baptist UniversityPRJNA62989893.50%28,949

References
TitleJournalPubmed ID
Host-Endosymbiont Genome Integration in a Deep-Sea Chemosymbiotic ClamMolecular Biology and Evolution32956455

Gene Information

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Gene IDDescription
Ama21585
Ama21586
Ama21588RNA POLYMERASE II TRANSCRIPTIONAL COACTIVATOR
Ama21589INHIBITOR OF APOPTOSIS
Ama21592
Ama21593
Ama21594
Ama21595BETA-1,4-MANNOSYLTRANSFERASE EGH
Ama21596
Ama21597TRANSAMINASE
Ama21598TATA-BOX BINDING PROTEIN
Ama21599
Ama21600
Ama21601
Ama21602
Ama21604CXC DOMAIN-CONTAINING PROTEIN-RELATED
Ama21605COILED-COIL DOMAIN-CONTAINING PROTEIN 162
Ama21608
Ama21611BETA-1,4-MANNOSYLTRANSFERASE EGH
Ama21612BETA-1,4-MANNOSYLTRANSFERASE EGH
Ama21613
Ama21614
Ama21615
Ama21617
Ama21618BETA-1,3-N-ACETYLGLUCOSAMINYLTRANSFERASE
Ama21620LEUCINE RICH REPEAT FAMILY PROTEIN
Ama21621
Ama21623SET DOMAIN-CONTAINING PROTEIN-RELATED
Ama21624AGAP005574-PA
Ama21625EXONUCLEASE, PHAGE-TYPE/RECB, C-TERMINAL DOMAIN-CONTAINING PROTEIN
Ama21626THAP DOMAIN PROTEIN
Ama21627EXONUCLEASE, PHAGE-TYPE/RECB, C-TERMINAL DOMAIN-CONTAINING PROTEIN
Ama21628PEPTIDASE
Ama21629EXONUCLEASE, PHAGE-TYPE/RECB, C-TERMINAL DOMAIN-CONTAINING PROTEIN
Ama21630PEPTIDASE
Ama21631PIGGYBAC TRANSPOSABLE ELEMENT-DERIVED PROTEIN 4
Ama21632PUTATIVE-RELATED
Ama21633DNA REPLICATION-RELATED ELEMENT FACTOR, ISOFORM A
Ama21634HAT FAMILY DIMERISATION DOMAINCONTAINING PROTEIN-RELATED
Ama21635PUTATIVE-RELATED
Ama21636
Ama21637
Ama21638SET DOMAIN-CONTAINING PROTEIN-RELATED
Ama21640
Ama21641
Ama21642
Ama21643REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Ama21645
Ama21647PHOSPHATIDYLINOSITOL GLYCAN, CLASS N
Ama21648PHOSPHATIDYLINOSITOL GLYCAN, CLASS N
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