The Deep-Sea Chemosymbiotic Clam Archivesica marissinica is a species of deep-sea clam in the family Vesicomyidae, commonly found at the Haima cold seep on the northwest continental slope of the South China Sea. This species is well-adapted to extreme environments and relies on symbiotic sulfur-oxidizing bacteria housed in its gills for nutrition. Archivesica marissinica plays a significant role in cold seep ecosystems by contributing to nutrient cycling and supporting diverse microbial and faunal communities.
Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
---|---|---|---|---|---|---|
Archivesica marissinica | Mollusca | Deep-Sea Clam | Hydrothermal vent | 1,361 | Haima cold seep in the South China Sea | 2291877 |
Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
---|---|---|---|---|---|---|---|---|
ASM1484369v1 | 1.5Gb | Chromosome | 2020 | JABXNX01 | Hong Kong Baptist University | PRJNA629898 | 93.50% | 28,949 |
Title | Journal | Pubmed ID |
---|---|---|
Host-Endosymbiont Genome Integration in a Deep-Sea Chemosymbiotic Clam | Molecular Biology and Evolution | 32956455 |
Gene ID | Description |
---|---|
Ama21799 | |
Ama217_5db7b01a | |
Ama21800 | MYOTROPHIN |
Ama21801 | AT09986P-RELATED |
Ama21803 | DENSITY-REGULATED PROTEIN HOMOLOG |
Ama21804 | |
Ama21805 | CLATHRIN HEAVY CHAIN RELATED |
Ama21806 | NEUROTRANSMITTER GATED ION CHANNEL |
Ama21807 | M-PHASE INDUCER PHOSPHATASE DUAL SPECIFICITY PHOSPHATASE CDC25 |
Ama21808 | M-PHASE INDUCER PHOSPHATASE DUAL SPECIFICITY PHOSPHATASE CDC25 |
Ama21809 | |
Ama21811 | UNCHARACTERIZED |
Ama21812 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
Ama21813 | FAM11A, B PROTEIN |
Ama21814 | NEUROTRANSMITTER GATED ION CHANNEL |
Ama21815 | RING FINGER PROTEIN 25 |
Ama21816 | MEMBRANE-ASSOCIATED PROGESTERONE RECEPTOR COMPONENT-RELATED |
Ama21817 | UPF0764 PROTEIN C16ORF89 |
Ama21818 | BCL7 RELATED |
Ama21819 | ASPARAGINE SYNTHETASE |
Ama21820 | PHOSPHOENOLPYRUVATE CARBOXYLASE |
Ama21821 | |
Ama21822 | ASPARAGINE SYNTHETASE |
Ama21823 | SOLUTE CARRIER FAMILY 5 |
Ama21824 | SOLUTE CARRIER FAMILY 5 |
Ama21825 | SOLUTE CARRIER FAMILY 5 |
Ama21826 | |
Ama21827 | ANKYRIN REPEAT FAMILY PROTEIN |
Ama21828 | M-PHASE PHOSPHOPROTEIN 9 |
Ama21829 | INTRAFLAGELLAR TRANSPORT PROTEIN 20 HOMOLOG |
Ama21830 | CENTROMERE PROTEIN M |
Ama21831 | NUDIX HYDROLASE |
Ama21832 | |
Ama21833 | BIOTINIDASE-RELATED |
Ama21834 | MCG131172, ISOFORM CRA_A |
Ama21835 | RING FINGER 10 FAMILY MEMBER |
Ama21838 | ATP-BINDING CASSETTE SUB-FAMILY C |
Ama21840 | SOLUTE CARRIER FAMILY 13 MEMBER |
Ama21841 | |
Ama21842 | 2-OXOGLUTARATE AND IRON-DEPENDENT OXYGENASE DOMAIN-CONTAINING PROTEIN 2 |
Ama21843 | |
Ama21844 | |
Ama21845 | AGAP001331-PA-RELATED |
Ama21846 | CXC DOMAIN-CONTAINING PROTEIN-RELATED |
Ama21847 | CXC DOMAIN-CONTAINING PROTEIN-RELATED |
Ama21848 | |
Ama21849 | EXPRESSED PROTEIN |
Ama21850 | PHAGE_INTEGRASE DOMAIN-CONTAINING PROTEIN |
Ama21851 | SGNH_HYDRO DOMAIN-CONTAINING PROTEIN |
Ama21852 | 52 KDA REPRESSOR OF THE INHIBITOR OF THE PROTEIN KINASE-LIKE PROTEIN-RELATED |