About Archivesica marissinica

The Deep-Sea Chemosymbiotic Clam Archivesica marissinica is a species of deep-sea clam in the family Vesicomyidae, commonly found at the Haima cold seep on the northwest continental slope of the South China Sea. This species is well-adapted to extreme environments and relies on symbiotic sulfur-oxidizing bacteria housed in its gills for nutrition. Archivesica marissinica plays a significant role in cold seep ecosystems by contributing to nutrient cycling and supporting diverse microbial and faunal communities.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Archivesica marissinicaMolluscaDeep-Sea ClamHydrothermal vent1,361Haima cold seep in the South China Sea2291877

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
ASM1484369v11.5GbChromosome2020JABXNX01Hong Kong Baptist UniversityPRJNA62989893.50%28,949

References
TitleJournalPubmed ID
Host-Endosymbiont Genome Integration in a Deep-Sea Chemosymbiotic ClamMolecular Biology and Evolution32956455

Gene Information

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Gene IDDescription
Ama21799
Ama217_5db7b01a
Ama21800MYOTROPHIN
Ama21801AT09986P-RELATED
Ama21803DENSITY-REGULATED PROTEIN HOMOLOG
Ama21804
Ama21805CLATHRIN HEAVY CHAIN RELATED
Ama21806NEUROTRANSMITTER GATED ION CHANNEL
Ama21807M-PHASE INDUCER PHOSPHATASE DUAL SPECIFICITY PHOSPHATASE CDC25
Ama21808M-PHASE INDUCER PHOSPHATASE DUAL SPECIFICITY PHOSPHATASE CDC25
Ama21809
Ama21811UNCHARACTERIZED
Ama21812REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Ama21813FAM11A, B PROTEIN
Ama21814NEUROTRANSMITTER GATED ION CHANNEL
Ama21815RING FINGER PROTEIN 25
Ama21816MEMBRANE-ASSOCIATED PROGESTERONE RECEPTOR COMPONENT-RELATED
Ama21817UPF0764 PROTEIN C16ORF89
Ama21818BCL7 RELATED
Ama21819ASPARAGINE SYNTHETASE
Ama21820PHOSPHOENOLPYRUVATE CARBOXYLASE
Ama21821
Ama21822ASPARAGINE SYNTHETASE
Ama21823SOLUTE CARRIER FAMILY 5
Ama21824SOLUTE CARRIER FAMILY 5
Ama21825SOLUTE CARRIER FAMILY 5
Ama21826
Ama21827ANKYRIN REPEAT FAMILY PROTEIN
Ama21828M-PHASE PHOSPHOPROTEIN 9
Ama21829INTRAFLAGELLAR TRANSPORT PROTEIN 20 HOMOLOG
Ama21830CENTROMERE PROTEIN M
Ama21831NUDIX HYDROLASE
Ama21832
Ama21833BIOTINIDASE-RELATED
Ama21834MCG131172, ISOFORM CRA_A
Ama21835RING FINGER 10 FAMILY MEMBER
Ama21838ATP-BINDING CASSETTE SUB-FAMILY C
Ama21840SOLUTE CARRIER FAMILY 13 MEMBER
Ama21841
Ama218422-OXOGLUTARATE AND IRON-DEPENDENT OXYGENASE DOMAIN-CONTAINING PROTEIN 2
Ama21843
Ama21844
Ama21845AGAP001331-PA-RELATED
Ama21846CXC DOMAIN-CONTAINING PROTEIN-RELATED
Ama21847CXC DOMAIN-CONTAINING PROTEIN-RELATED
Ama21848
Ama21849EXPRESSED PROTEIN
Ama21850PHAGE_INTEGRASE DOMAIN-CONTAINING PROTEIN
Ama21851SGNH_HYDRO DOMAIN-CONTAINING PROTEIN
Ama2185252 KDA REPRESSOR OF THE INHIBITOR OF THE PROTEIN KINASE-LIKE PROTEIN-RELATED
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