The Deep-Sea Chemosymbiotic Clam Archivesica marissinica is a species of deep-sea clam in the family Vesicomyidae, commonly found at the Haima cold seep on the northwest continental slope of the South China Sea. This species is well-adapted to extreme environments and relies on symbiotic sulfur-oxidizing bacteria housed in its gills for nutrition. Archivesica marissinica plays a significant role in cold seep ecosystems by contributing to nutrient cycling and supporting diverse microbial and faunal communities.
Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
---|---|---|---|---|---|---|
Archivesica marissinica | Mollusca | Deep-Sea Clam | Hydrothermal vent | 1,361 | Haima cold seep in the South China Sea | 2291877 |
Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
---|---|---|---|---|---|---|---|---|
ASM1484369v1 | 1.5Gb | Chromosome | 2020 | JABXNX01 | Hong Kong Baptist University | PRJNA629898 | 93.50% | 28,949 |
Title | Journal | Pubmed ID |
---|---|---|
Host-Endosymbiont Genome Integration in a Deep-Sea Chemosymbiotic Clam | Molecular Biology and Evolution | 32956455 |
Gene ID | Description |
---|---|
Ama21981 | CYSTEINE PROTEASE FAMILY C1-RELATED |
Ama21983 | |
Ama21984 | |
Ama21985 | INHIBITOR OF APOPTOSIS |
Ama21986 | COILED-COIL DOMAIN-CONTAINING 74A |
Ama21987 | |
Ama21988 | POTASSIUM CHANNEL TETRAMERIZATION DOMAIN-CONTAINING |
Ama21989 | PHOSPHONATES-BINDING PERIPLASMIC PROTEIN |
Ama21990 | SODIUM/CHLORIDE DEPENDENT TRANSPORTER |
Ama21991 | |
Ama21992 | PROTEIN CBG03580 |
Ama21994 | METALLOPHOSPHOESTERASE |
Ama21995 | |
Ama21996 | NADH DEHYDROGENASE |
Ama21997 | CELL DEATH ACTIVATOR CIDE |
Ama21998 | NADH DEHYDROGENASE |
Ama21999 | NADH DEHYDROGENASE |
Ama219_5db7b01a | CUBILIN-LIKE PROTEIN |
Ama22000 | METALLOPHOSPHOESTERASE |
Ama22001 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
Ama22002 | |
Ama22003 | REQUIRED FOR MEIOTIC NUCLEAR DIVISION PROTEIN 1 HOMOLOG |
Ama22004 | INHIBITOR OF APOPTOSIS |
Ama22005 | RNA POLYMERASE II TRANSCRIPTIONAL COACTIVATOR |
Ama22006 | |
Ama22011 | THAP DOMAIN PROTEIN |
Ama22012 | STEROL DESATURASE |
Ama22013 | MITOCHONDRIAL IMPORT INNER MEMBRANE TRANSLOCASE SUBUNIT TIM10 |
Ama22014 | N-LYSINE METHYLTRANSFERASE KMT5A |
Ama22015 | |
Ama22016 | TRANSPOSON |
Ama22017 | |
Ama22018 | KINESIN-RELATED |
Ama22019 | KINESIN-RELATED |
Ama22020 | COILED-COIL-HELIX-COILED-COIL-HELIX DOMAIN CONTAINING 2/NUR77 |
Ama22022 | LEUCINE-ZIPPER-LIKE TRANSCRIPTIONAL REGULATOR 1 |
Ama22023 | SERINE/THREONINE-PROTEIN KINASE |
Ama22025 | |
Ama22026 | SERINE/THREONINE PROTEIN PHOSPHATASE |
Ama22027 | MYOTROPHIN |
Ama22028 | |
Ama22029 | LEUCINE-ZIPPER-LIKE TRANSCRIPTIONAL REGULATOR 1 |
Ama22030 | |
Ama22031 | |
Ama22032 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
Ama22033 | PHAGE_INTEGRASE DOMAIN-CONTAINING PROTEIN |
Ama22034 | CYCLIC NUCLEOTIDE-GATED CATION CHANNEL SUBUNIT A |
Ama22035 | |
Ama22036 | CYCLIC NUCLEOTIDE-GATED CATION CHANNEL SUBUNIT A |
Ama22037 | AGAP012002-PA |