About Archivesica marissinica

The Deep-Sea Chemosymbiotic Clam Archivesica marissinica is a species of deep-sea clam in the family Vesicomyidae, commonly found at the Haima cold seep on the northwest continental slope of the South China Sea. This species is well-adapted to extreme environments and relies on symbiotic sulfur-oxidizing bacteria housed in its gills for nutrition. Archivesica marissinica plays a significant role in cold seep ecosystems by contributing to nutrient cycling and supporting diverse microbial and faunal communities.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Archivesica marissinicaMolluscaDeep-Sea ClamHydrothermal vent1,361Haima cold seep in the South China Sea2291877

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
ASM1484369v11.5GbChromosome2020JABXNX01Hong Kong Baptist UniversityPRJNA62989893.50%28,949

References
TitleJournalPubmed ID
Host-Endosymbiont Genome Integration in a Deep-Sea Chemosymbiotic ClamMolecular Biology and Evolution32956455

Gene Information

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Gene IDDescription
Ama21981CYSTEINE PROTEASE FAMILY C1-RELATED
Ama21983
Ama21984
Ama21985INHIBITOR OF APOPTOSIS
Ama21986COILED-COIL DOMAIN-CONTAINING 74A
Ama21987
Ama21988POTASSIUM CHANNEL TETRAMERIZATION DOMAIN-CONTAINING
Ama21989PHOSPHONATES-BINDING PERIPLASMIC PROTEIN
Ama21990SODIUM/CHLORIDE DEPENDENT TRANSPORTER
Ama21991
Ama21992PROTEIN CBG03580
Ama21994METALLOPHOSPHOESTERASE
Ama21995
Ama21996NADH DEHYDROGENASE
Ama21997CELL DEATH ACTIVATOR CIDE
Ama21998NADH DEHYDROGENASE
Ama21999NADH DEHYDROGENASE
Ama219_5db7b01aCUBILIN-LIKE PROTEIN
Ama22000METALLOPHOSPHOESTERASE
Ama22001REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Ama22002
Ama22003REQUIRED FOR MEIOTIC NUCLEAR DIVISION PROTEIN 1 HOMOLOG
Ama22004INHIBITOR OF APOPTOSIS
Ama22005RNA POLYMERASE II TRANSCRIPTIONAL COACTIVATOR
Ama22006
Ama22011THAP DOMAIN PROTEIN
Ama22012STEROL DESATURASE
Ama22013MITOCHONDRIAL IMPORT INNER MEMBRANE TRANSLOCASE SUBUNIT TIM10
Ama22014N-LYSINE METHYLTRANSFERASE KMT5A
Ama22015
Ama22016TRANSPOSON
Ama22017
Ama22018KINESIN-RELATED
Ama22019KINESIN-RELATED
Ama22020COILED-COIL-HELIX-COILED-COIL-HELIX DOMAIN CONTAINING 2/NUR77
Ama22022LEUCINE-ZIPPER-LIKE TRANSCRIPTIONAL REGULATOR 1
Ama22023SERINE/THREONINE-PROTEIN KINASE
Ama22025
Ama22026SERINE/THREONINE PROTEIN PHOSPHATASE
Ama22027MYOTROPHIN
Ama22028
Ama22029LEUCINE-ZIPPER-LIKE TRANSCRIPTIONAL REGULATOR 1
Ama22030
Ama22031
Ama22032REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Ama22033PHAGE_INTEGRASE DOMAIN-CONTAINING PROTEIN
Ama22034CYCLIC NUCLEOTIDE-GATED CATION CHANNEL SUBUNIT A
Ama22035
Ama22036CYCLIC NUCLEOTIDE-GATED CATION CHANNEL SUBUNIT A
Ama22037AGAP012002-PA
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