About Archivesica marissinica

The Deep-Sea Chemosymbiotic Clam Archivesica marissinica is a species of deep-sea clam in the family Vesicomyidae, commonly found at the Haima cold seep on the northwest continental slope of the South China Sea. This species is well-adapted to extreme environments and relies on symbiotic sulfur-oxidizing bacteria housed in its gills for nutrition. Archivesica marissinica plays a significant role in cold seep ecosystems by contributing to nutrient cycling and supporting diverse microbial and faunal communities.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Archivesica marissinicaMolluscaDeep-Sea ClamHydrothermal vent1,361Haima cold seep in the South China Sea2291877

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
ASM1484369v11.5GbChromosome2020JABXNX01Hong Kong Baptist UniversityPRJNA62989893.50%28,949

References
TitleJournalPubmed ID
Host-Endosymbiont Genome Integration in a Deep-Sea Chemosymbiotic ClamMolecular Biology and Evolution32956455

Gene Information

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Gene IDDescription
Ama21649PHAGE_INTEGRASE DOMAIN-CONTAINING PROTEIN
Ama21650
Ama21678ZGC:174356
Ama21679
Ama21680
Ama21681PHOSPHATIDYLINOSITOL KINASE
Ama21682TRANSCRIPTASE, PUTATIVE-RELATED-RELATED
Ama21684
Ama21688PUTATIVE-RELATED
Ama21689
Ama21690CYTOCHROME P450 FAMILY 4
Ama21691
Ama21692GLYCOSYLTRANSFERASE
Ama21693ANTIBIOTIC RESISTANCE PROTEIN MCBG
Ama21696EUKARYOTIC TRANSLATION INITIATION FACTOR 4E TRANSPORTER
Ama21697DEVELOPMENTALLY-REGULATED GTP-BINDING PROTEIN 2
Ama21698
Ama21699FRINGE-RELATED
Ama216_5db7b01a
Ama21700TRANSMEMBRANE PROTEIN 199
Ama21701
Ama21702
Ama21703EXONUCLEASE, PHAGE-TYPE/RECB, C-TERMINAL DOMAIN-CONTAINING PROTEIN
Ama21704ATP-DEPENDENT DNA HELICASE
Ama21705PHAGE_INTEGRASE DOMAIN-CONTAINING PROTEIN
Ama21707
Ama21708PHOSPHATIDYLINOSITOL TRANSFER PROTEIN
Ama21712
Ama21713
Ama21714SUPPRESSOR OF TY 4
Ama21715CASPASE REGULATOR, RING FINGER DOMAIN-CONTAINING
Ama2171660S ACIDIC RIBOSOMAL PROTEIN FAMILY MEMBER
Ama21717RING-TYPE DOMAIN-CONTAINING PROTEIN
Ama21718MELANOMA-ASSOCIATED ANTIGEN MAGE ANTIGEN
Ama21719THREONINE DEHYDRATASE, MITOCHONDRIAL-RELATED
Ama21721
Ama2172252 KDA REPRESSOR OF THE INHIBITOR OF THE PROTEIN KINASE-LIKE PROTEIN-RELATED
Ama21723
Ama21725MAJOR VAULT PROTEIN
Ama21726
Ama21727L-ASPARTATE DEHYDROGENASE-RELATED
Ama21729G-PROTEIN COUPLED RECEPTOR
Ama21731-
Ama21734SI:CH211-108C17.2-RELATED-RELATED
Ama21735DEOXYRIBONUCLEASE TATDN2-RELATED
Ama21736ULP_PROTEASE DOMAIN-CONTAINING PROTEIN
Ama21737SYNAPTIC VESICLE GLYCOPROTEIN 2
Ama21738
Ama21739
Ama21740CALCIUM BINDING PROTEIN
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